RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 SRPK1Q96SB4 655 aaKnown RBP8.17□□□□□ -1.1
CHD1-209ENST00000512844 CCDC113Q9H0I3 377 aa8.17□□□□□ -1.1
CHD1-209ENST00000512844 SLC6A17Q9H1V8 727 aa8.17□□□□□ -1.1
CHD1-209ENST00000512844 NPHP3-ACAD11A0A0J9YXS1 232 aa8.16□□□□□ -1.1
CHD1-209ENST00000512844 FADS2P1A8MWK0 482 aa8.16□□□□□ -1.1
CHD1-209ENST00000512844 HOXC12P31275 282 aa8.16□□□□□ -1.1
CHD1-209ENST00000512844 SCRN1Q12765 414 aa8.16□□□□□ -1.1
CHD1-209ENST00000512844 FYB2Q5VWT5 728 aa8.16□□□□□ -1.1
CHD1-209ENST00000512844 ZNF513Q8N8E2 541 aaPredicted RBP8.16□□□□□ -1.1
CHD1-209ENST00000512844 IPO9Q96P70 1041 aaKnown RBP8.16□□□□□ -1.1
CHD1-209ENST00000512844 NKX2-4Q9H2Z4 354 aa8.16□□□□□ -1.1
CHD1-209ENST00000512844 CYP26B1Q9NR63 512 aa8.16□□□□□ -1.1
CHD1-209ENST00000512844 CPP00450 1065 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 ECI1P42126 302 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 RASGRF1Q13972 1273 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 NFE2L2Q16236 605 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 NUP43Q8NFH3 380 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
CHD1-209ENST00000512844 MRGPRX3Q96LB0 322 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 DEPDC7Q96QD5 511 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 RNF32Q9H0A6 362 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 OSBPL2Q9H1P3 480 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 USP35Q9P2H5 1018 aa8.15□□□□□ -1.1
CHD1-209ENST00000512844 PSPNO60542 156 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 L1CAMP32004 1257 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 PDE6BP35913 854 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 SSRP1Q08945 709 aaKnown RBP8.14□□□□□ -1.11
CHD1-209ENST00000512844 HSF5Q4G112 596 aaPredicted RBP8.14□□□□□ -1.11
CHD1-209ENST00000512844 LRP10Q7Z4F1 713 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 SLCO6A1Q86UG4 719 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 MCMBPQ9BTE3 642 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 LGR4Q9BXB1 951 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 EBF1Q9UH73 591 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 MSRB2Q9Y3D2 182 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 RNF114Q9Y508 228 aa8.14□□□□□ -1.11
CHD1-209ENST00000512844 LRRC10BA6NIK2 292 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 PRKCAP17252 672 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 PPP2R2AP63151 447 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 IQCEQ6IPM2 695 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 SIRT2Q8IXJ6 389 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 KCTD13Q8WZ19 329 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 MKL1Q969V6 931 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 JMJD8Q96S16 334 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 AARSD1Q9BTE6 412 aaKnown RBP8.13□□□□□ -1.11
CHD1-209ENST00000512844 CRTAC1Q9NQ79 661 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 CLEC1BQ9P126 229 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 PFDN2Q9UHV9 154 aa8.13□□□□□ -1.11
CHD1-209ENST00000512844 TRAV20A0A0B4J274 112 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 A0A1W2PQU0 124 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 MEFVO15553 781 aaPredicted RBP8.12□□□□□ -1.11
CHD1-209ENST00000512844 NPHS1O60500 1241 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 CYP4F8P98187 520 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 SERINC3Q13530 473 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 TIGD5Q53EQ6 642 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 CABP7Q86V35 215 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 MRFAP1L1Q96HT8 127 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 CDC6Q99741 560 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 SNTG2Q9NY99 539 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 IMPACTQ9P2X3 320 aa8.12□□□□□ -1.11
CHD1-209ENST00000512844 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
CHD1-209ENST00000512844 TBX1O43435 398 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 MYO1BO43795 1136 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 THBDP07204 575 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 PLS3P13797 630 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 PNLIPP16233 465 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 MLANAQ16655 118 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 ADGRF1Q5T601 910 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 OLFML2BQ68BL8 750 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 NLRX1Q86UT6 975 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 USP33Q8TEY7 942 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 LIN37Q96GY3 246 aaPredicted RBP8.11□□□□□ -1.11
CHD1-209ENST00000512844 INTS4Q96HW7 963 aaKnown RBP8.11□□□□□ -1.11
CHD1-209ENST00000512844 SPATA9Q9BWV2 254 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 ZSWIM4Q9H7M6 989 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 GPRC5CQ9NQ84 441 aa8.11□□□□□ -1.11
CHD1-209ENST00000512844 OR14I1A6ND48 311 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 CORO7P57737 925 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 TMEM62Q0P6H9 643 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 KCNAB2Q13303 367 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 BMS1Q14692 1282 aaKnown RBP8.1□□□□□ -1.11
CHD1-209ENST00000512844 E4F1Q66K89 784 aaPredicted RBP8.1□□□□□ -1.11
CHD1-209ENST00000512844 CPNE8Q86YQ8 564 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 IRF2BP1Q8IU81 584 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 TMEM52Q8NDY8 209 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 COPS5Q92905 334 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 IER2Q9BTL4 223 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 EPB41L4BQ9H329 900 aa8.1□□□□□ -1.11
CHD1-209ENST00000512844 MPOP05164 745 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 GFRA1P56159 465 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 RASA3Q14644 834 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 LCE3BQ5TA77 95 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 DPH6Q7L8W6 267 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 PPIL6Q8IXY8 311 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 DIO2Q92813 273 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 DIRC2Q96SL1 478 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 MMP19Q99542 508 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 PLCD4Q9BRC7 762 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 NSUN3Q9H649 340 aaKnown RBP8.09□□□□□ -1.11
CHD1-209ENST00000512844 SP110Q9HB58 689 aa8.09□□□□□ -1.11
CHD1-209ENST00000512844 DCP1AQ9NPI6 582 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms