RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 TXNDC16Q9P2K2 825 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 LRWD1Q9UFC0 647 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 RPAP1Q9BWH6 1393 aaPredicted RBP11.95□□□□□ -0.5
CPNE4-209ENST00000512055 COBLO75128 1261 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 APOEP02649 317 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 IFNAR1P17181 557 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 RAP1GDS1P52306 607 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 PLCB3Q01970 1234 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 CETN1Q12798 172 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 REXO1Q8N1G1 1221 aaKnown RBP11.95□□□□□ -0.5
CPNE4-209ENST00000512055 DYNLL2Q96FJ2 89 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 CCDC42Q96M95 316 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
CPNE4-209ENST00000512055 UTYO14607 1347 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 RAD51AP2Q09MP3 1159 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 KRT25Q7Z3Z0 450 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 USP37Q86T82 979 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 KIAA0825Q8IV33 1275 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 MYRIPQ8NFW9 859 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 YY1AP1Q9H869 796 aa11.95□□□□□ -0.5
CPNE4-209ENST00000512055 ATP2B4P23634 1241 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 CA8P35219 290 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 ADCY7P51828 1080 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 MB21D2Q8IYB1 491 aaPredicted RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 NEK11Q8NG66 645 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 SYMPKQ92797 1274 aaKnown RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 IWS1Q96ST2 819 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 THRAP3Q9Y2W1 955 aaKnown RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 ZFXP17010 805 aaPredicted RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 LIFRP42702 1097 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 USH1GQ495M9 461 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 BICD1Q96G01 975 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 RIMS1Q86UR5 1692 aaKnown RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 XDHP47989 1333 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 E7EVH7 732 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 H0YIN7 160 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 WBP4O75554 376 aaKnown RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 MMP1P03956 469 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 PRDX5P30044 214 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 GJC1P36383 396 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 NELFBQ8WX92 580 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 EEF2KMTQ96G04 330 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 NOC4LQ9BVI4 516 aaKnown RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 RNF26Q9BY78 433 aaPredicted RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 MINPP1Q9UNW1 487 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 SALL3Q9BXA9 1300 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 TRAF5O00463 557 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 DDAH1O94760 285 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 SERPINB2P05120 415 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 E2F5Q15329 346 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 UAP1Q16222 522 aaPredicted RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 PDCD2Q16342 344 aaPredicted RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 GEN1Q17RS7 908 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 CABP7Q86V35 215 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 LRRC8AQ8IWT6 810 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 ZNF280CQ8ND82 737 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 SNX29Q8TEQ0 813 aa11.94□□□□□ -0.5
CPNE4-209ENST00000512055 LARSQ9P2J5 1176 aaKnown RBP11.94□□□□□ -0.5
CPNE4-209ENST00000512055 TRPC3Q13507 836 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 TSGA10IPQ3SY00 556 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 LONRF3Q496Y0 759 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 TBC1D9BQ66K14 1250 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 HAUS1Q96CS2 278 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 FOXP1Q9H334 677 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-209ENST00000512055 MEGF6O75095 1541 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CREB3O43889 395 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 DDIT3P35638 169 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CHMP4BP1P59074 171 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CLUL1Q15846 466 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CLEC4GQ6UXB4 293 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CCDC125Q86Z20 511 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 ZBTB21Q9ULJ3 1066 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 PCDHB6Q9Y5E3 794 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-209ENST00000512055 A6NNZ2 444 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 SEMA3EO15041 775 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CDC25AP30304 524 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 PLS1Q14651 629 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 ELF2Q15723 593 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 TUBB8Q3ZCM7 444 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 EFCC1Q9HA90 598 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 KRT86O43790 486 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 PPP6R2O75170 966 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CLTAP09496 248 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CALCRLQ16602 461 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 N4BP2L2Q92802 583 aaPredicted RBP11.93□□□□□ -0.5
CPNE4-209ENST00000512055 MRRFQ96E11 262 aaKnown RBP11.93□□□□□ -0.5
CPNE4-209ENST00000512055 LZTS2Q9BRK4 669 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 QTRT2Q9H974 415 aaKnown RBP11.93□□□□□ -0.5
CPNE4-209ENST00000512055 COL15A1P39059 1388 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CPDO75976 1380 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CYP2D6P10635 497 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 CDC27P30260 824 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 SNCBQ16143 134 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 FAN1Q9Y2M0 1017 aa11.93□□□□□ -0.5
CPNE4-209ENST00000512055 LEMD3Q9Y2U8 911 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms