RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 CEP95Q96GE4 821 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 HS3ST6Q96QI5 342 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 TMEM47Q9BQJ4 181 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.02□□□□□ -0.49
HOXA4-203ENST00000511914 SLC26A6Q9BXS9 759 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 PRO3102Q9H379 93 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 KANSL2Q9H9L4 492 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.02□□□□□ -0.49
HOXA4-203ENST00000511914 LMBRD1Q9NUN5 540 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 NYAP2Q9P242 653 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 CFAP45Q9UL16 551 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 AGTPBP1Q9UPW5 1226 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 ELP1O95163 1332 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 SIPA1L1O43166 1804 aa12.02□□□□□ -0.49
HOXA4-203ENST00000511914 COL6A3P12111 3177 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 PALM3A6NDB9 673 aaPredicted RBP12.01□□□□□ -0.49
HOXA4-203ENST00000511914 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 MBD3O95983 291 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 NCLP19338 710 aaKnown RBP12.01□□□□□ -0.49
HOXA4-203ENST00000511914 KLHL40Q2TBA0 621 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 CERKLQ49MI3 558 aaPredicted RBP12.01□□□□□ -0.49
HOXA4-203ENST00000511914 FOXD4L5Q5VV16 416 aaPredicted RBP12.01□□□□□ -0.49
HOXA4-203ENST00000511914 TMEM179Q6ZVK1 233 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 RAB11FIP4Q86YS3 637 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 CCDC144CPQ8IYA2 1237 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 FOXD4L4Q8WXT5 416 aaPredicted RBP12.01□□□□□ -0.49
HOXA4-203ENST00000511914 MKL1Q969V6 931 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 PAWRQ96IZ0 340 aaKnown RBP12.01□□□□□ -0.49
HOXA4-203ENST00000511914 ZNF396Q96N95 335 aaPredicted RBP12.01□□□□□ -0.49
HOXA4-203ENST00000511914 KRTAP3-3Q9BYR6 98 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 KRTAP3-2Q9BYR7 98 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 PAK6Q9NQU5 681 aaPredicted RBP12.01□□□□□ -0.49
HOXA4-203ENST00000511914 SH3GLB2Q9NR46 395 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 GINM1Q9NU53 330 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 STX8Q9UNK0 236 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 SLC45A1Q9Y2W3 748 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 LAMA3Q16787 3333 aa12.01□□□□□ -0.49
HOXA4-203ENST00000511914 SNHG28P0DPA3 235 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 AKR1B1P15121 316 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.49
HOXA4-203ENST00000511914 HMGCS2P54868 508 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 TRIM32Q13049 653 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 SPP2Q13103 211 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 IRF5Q13568 498 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 SAFBQ15424 915 aaKnown RBP eCLIP12□□□□□ -0.49
HOXA4-203ENST00000511914 ASPRV1Q53RT3 343 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 C7orf61Q8IZ16 206 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 SLC17A8Q8NDX2 589 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 PHKBQ93100 1093 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 SPZ1Q9BXG8 430 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 XRN2Q9H0D6 950 aaKnown RBP eCLIP12□□□□□ -0.49
HOXA4-203ENST00000511914 DNAJC18Q9H819 358 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 PNMA3Q9UL41 463 aa12□□□□□ -0.49
HOXA4-203ENST00000511914 PEX10O60683 326 aa11.99□□□□□ -0.49
HOXA4-203ENST00000511914 PRPF40AO75400 957 aaKnown RBP11.99□□□□□ -0.49
HOXA4-203ENST00000511914 PARP1P09874 1014 aaKnown RBP11.99□□□□□ -0.49
HOXA4-203ENST00000511914 DNM1Q05193 864 aaKnown RBP11.99□□□□□ -0.49
HOXA4-203ENST00000511914 FAM110CQ1W6H9 321 aa11.99□□□□□ -0.49
HOXA4-203ENST00000511914 KRT40Q6A162 431 aa11.99□□□□□ -0.49
HOXA4-203ENST00000511914 SRBD1Q8N5C6 995 aaKnown RBP11.99□□□□□ -0.49
HOXA4-203ENST00000511914 FOXP1Q9H334 677 aaPredicted RBP11.99□□□□□ -0.49
HOXA4-203ENST00000511914 CABP5Q9NP86 173 aa11.99□□□□□ -0.49
HOXA4-203ENST00000511914 MAD2L2Q9UI95 211 aa11.99□□□□□ -0.49
HOXA4-203ENST00000511914 ZMYND8Q9ULU4 1186 aaPredicted RBP11.99□□□□□ -0.49
HOXA4-203ENST00000511914 V9GY48 417 aaPredicted RBP11.99□□□□□ -0.49
HOXA4-203ENST00000511914 CNTNAP5Q8WYK1 1306 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 DLL1O00548 723 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 PLEKHA8P1O95397 391 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 MMP1P03956 469 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 SYN1P17600 705 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 UBE2HP62256 183 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 PDAP1Q13442 181 aaKnown RBP11.98□□□□□ -0.49
HOXA4-203ENST00000511914 RRP1BQ14684 758 aaKnown RBP11.98□□□□□ -0.49
HOXA4-203ENST00000511914 PKN1Q16512 942 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 ABCB5Q2M3G0 1257 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 GPATCH4Q5T3I0 446 aaKnown RBP11.98□□□□□ -0.49
HOXA4-203ENST00000511914 GALNT17Q6IS24 598 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 NECAB2Q7Z6G3 386 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 FERMT3Q86UX7 667 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 PROCA1Q8NCQ7 364 aaPredicted RBP11.98□□□□□ -0.49
HOXA4-203ENST00000511914 ZNF280CQ8ND82 737 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 CRISPLD2Q9H0B8 497 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 CLIP2Q9UDT6 1046 aa11.98□□□□□ -0.49
HOXA4-203ENST00000511914 DDX49Q9Y6V7 483 aaKnown RBP11.98□□□□□ -0.49
HOXA4-203ENST00000511914 FRMPD3Q5JV73 1810 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 KLRF2D3W0D1 207 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 hCG_1984214I3L0E3 225 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 MPHOSPH10O00566 681 aaKnown RBP11.97□□□□□ -0.49
HOXA4-203ENST00000511914 HMGCRP04035 888 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 PDHBP11177 359 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 SCG2P13521 617 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 CYP2B6P20813 491 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 CALML3P27482 149 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 PFKFB3Q16875 520 aaPredicted RBP11.97□□□□□ -0.49
HOXA4-203ENST00000511914 ZNF713Q8N859 430 aaPredicted RBP11.97□□□□□ -0.49
HOXA4-203ENST00000511914 GMCL1P1Q8NEA9 526 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 ASCC2Q9H1I8 757 aaPredicted RBP11.97□□□□□ -0.49
HOXA4-203ENST00000511914 BRMS1Q9HCU9 246 aa11.97□□□□□ -0.49
HOXA4-203ENST00000511914 RCOR1Q9UKL0 485 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms