RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 RIOX1Q9H6W3 641 aa18.71■□□□□ 0.58
SIM1-204ENST00000511871 PFASO15067 1338 aa18.7■□□□□ 0.58
SIM1-204ENST00000511871 CYTH3O43739 400 aa18.7■□□□□ 0.58
SIM1-204ENST00000511871 BLOC1S2Q6QNY1 142 aa18.7■□□□□ 0.58
SIM1-204ENST00000511871 FAM133AQ8N9E0 248 aa18.7■□□□□ 0.58
SIM1-204ENST00000511871 TRPV1Q8NER1 839 aa18.7■□□□□ 0.58
SIM1-204ENST00000511871 CTCFLQ8NI51 663 aaPredicted RBP18.7■□□□□ 0.58
SIM1-204ENST00000511871 TINF2Q9BSI4 451 aa18.7■□□□□ 0.58
SIM1-204ENST00000511871 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
SIM1-204ENST00000511871 NFIBO00712 420 aa18.69■□□□□ 0.58
SIM1-204ENST00000511871 CALM1P0DP23 149 aa18.69■□□□□ 0.58
SIM1-204ENST00000511871 CALM2P0DP24 149 aa18.69■□□□□ 0.58
SIM1-204ENST00000511871 CALM3P0DP25 149 aa18.69■□□□□ 0.58
SIM1-204ENST00000511871 CYBAP13498 195 aa18.69■□□□□ 0.58
SIM1-204ENST00000511871 KIF5BP33176 963 aa18.69■□□□□ 0.58
SIM1-204ENST00000511871 USH1GQ495M9 461 aa18.69■□□□□ 0.58
SIM1-204ENST00000511871 ZNF467Q7Z7K2 595 aaPredicted RBP18.69■□□□□ 0.58
SIM1-204ENST00000511871 CRISPLD2Q9H0B8 497 aa18.69■□□□□ 0.58
SIM1-204ENST00000511871 CYP39A1Q9NYL5 469 aa18.69■□□□□ 0.58
SIM1-204ENST00000511871 POTEB2H3BUK9 544 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 RXRAP19793 462 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 RPS6KB1P23443 525 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 PSMA5P28066 241 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 CNTN2Q02246 1040 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 APOA5Q6Q788 366 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 MAMDC4Q6UXC1 1216 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 NSMFQ6X4W1 530 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 FBXO11Q86XK2 927 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 RAB11FIP4Q86YS3 637 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 MSL3Q8N5Y2 521 aaKnown RBP18.68■□□□□ 0.58
SIM1-204ENST00000511871 BRPF3Q9ULD4 1205 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 LRRC37A2A6NM11 1700 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 ABCB11O95342 1321 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 BRCA2P51587 3418 aa18.68■□□□□ 0.58
SIM1-204ENST00000511871 SOWAHBA6NEL2 793 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 ZBTB5O15062 677 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 CAPN2P17655 700 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 CASTP20810 708 aaKnown RBP18.67■□□□□ 0.58
SIM1-204ENST00000511871 SMARCA1P28370 1054 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 PRAMEF19Q5SWL8 479 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 Q6ZUG5 572 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 PIGSQ96S52 555 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 PPP1R11O60927 126 aaPredicted RBP18.67■□□□□ 0.58
SIM1-204ENST00000511871 GNAQP50148 359 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 BAATQ14032 418 aaPredicted RBP18.67■□□□□ 0.58
SIM1-204ENST00000511871 SYNE3Q6ZMZ3 975 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 CCDC144CPQ8IYA2 1237 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 FBXL16Q8N461 479 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 FANCBQ8NB91 859 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 LZTS2Q9BRK4 669 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 SPZ1Q9BXG8 430 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 AMNQ9BXJ7 453 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 TM6SF1Q9BZW5 370 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 ZSWIM6Q9HCJ5 1215 aa18.67■□□□□ 0.58
SIM1-204ENST00000511871 SYNGAP1Q96PV0 1343 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 EIF5BO60841 1220 aaKnown RBP18.66■□□□□ 0.58
SIM1-204ENST00000511871 PLEKHA8P1O95397 391 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 SEC24BO95487 1268 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 SNAI1O95863 264 aaPredicted RBP18.66■□□□□ 0.58
SIM1-204ENST00000511871 LHX8Q68G74 356 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 RNF207Q6ZRF8 634 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 MICU3Q86XE3 530 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 HOMER1Q86YM7 354 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 SRBD1Q8N5C6 995 aaKnown RBP18.66■□□□□ 0.58
SIM1-204ENST00000511871 RGS22Q8NE09 1264 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 AGXT2Q9BYV1 514 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 NRBP1Q9UHY1 535 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 ASTN1O14525 1302 aa18.66■□□□□ 0.58
SIM1-204ENST00000511871 TFRCP02786 760 aaKnown RBP18.65■□□□□ 0.58
SIM1-204ENST00000511871 CNGA1P29973 690 aa18.65■□□□□ 0.58
SIM1-204ENST00000511871 MLLT1Q03111 559 aaPredicted RBP18.65■□□□□ 0.58
SIM1-204ENST00000511871 SLC30A10Q6XR72 485 aa18.65■□□□□ 0.58
SIM1-204ENST00000511871 RUFY3Q7L099 469 aa18.65■□□□□ 0.58
SIM1-204ENST00000511871 PURBQ96QR8 312 aaKnown RBP18.65■□□□□ 0.58
SIM1-204ENST00000511871 MAF1Q9H063 256 aa18.65■□□□□ 0.58
SIM1-204ENST00000511871 DDX20Q9UHI6 824 aaKnown RBP18.65■□□□□ 0.58
SIM1-204ENST00000511871 OGDHLQ9ULD0 1010 aa18.65■□□□□ 0.58
SIM1-204ENST00000511871 MRPL11Q9Y3B7 192 aaKnown RBP18.65■□□□□ 0.58
SIM1-204ENST00000511871 PNMA6FA0A0J9YX94 578 aa18.64■□□□□ 0.57
SIM1-204ENST00000511871 KLF18A0A0U1RQI7 1052 aa18.64■□□□□ 0.57
SIM1-204ENST00000511871 PTPDC1A2A3K4 754 aa18.64■□□□□ 0.57
SIM1-204ENST00000511871 ZBTB43O43298 467 aa18.64■□□□□ 0.57
SIM1-204ENST00000511871 RPS6P62753 249 aaKnown RBP18.64■□□□□ 0.57
SIM1-204ENST00000511871 FGD1P98174 961 aa18.64■□□□□ 0.57
SIM1-204ENST00000511871 TBC1D5Q92609 795 aa18.64■□□□□ 0.57
SIM1-204ENST00000511871 BRF1Q92994 677 aa18.64■□□□□ 0.57
SIM1-204ENST00000511871 PDE4DIPQ5VU43 2346 aa18.64■□□□□ 0.57
SIM1-204ENST00000511871 TNRC18O15417 2968 aaPredicted RBP18.64■□□□□ 0.57
SIM1-204ENST00000511871 SEPT4O43236 478 aa18.63■□□□□ 0.57
SIM1-204ENST00000511871 ZNF865P0CJ78 1059 aaPredicted RBP18.63■□□□□ 0.57
SIM1-204ENST00000511871 RCAN1P53805 252 aa18.63■□□□□ 0.57
SIM1-204ENST00000511871 APOBRQ0VD83 1088 aa18.63■□□□□ 0.57
SIM1-204ENST00000511871 C8orf34Q49A92 452 aa18.63■□□□□ 0.57
SIM1-204ENST00000511871 TMTC3Q6ZXV5 915 aa18.63■□□□□ 0.57
SIM1-204ENST00000511871 ARMCX2Q7L311 632 aa18.63■□□□□ 0.57
SIM1-204ENST00000511871 CMTR1Q8N1G2 835 aaKnown RBP18.63■□□□□ 0.57
SIM1-204ENST00000511871 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.63■□□□□ 0.57
SIM1-204ENST00000511871 PCDHA1Q9Y5I3 950 aa18.63■□□□□ 0.57
SIM1-204ENST00000511871 OPLAHO14841 1288 aa18.63■□□□□ 0.57
SIM1-204ENST00000511871 MSCO60682 206 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms