RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 LCORLQ8N3X6 602 aa10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 DEPTORQ8TB45 409 aa10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 MAGEF1Q9HAY2 307 aa10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 FARP2O94887 1054 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 USH1GQ495M9 461 aa10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 NBPF12Q5TAG4 269 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 Q6ZUG5 572 aa10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 SEPT8Q92599 483 aa10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 PRDM5Q9NQX1 630 aaPredicted RBP10.88□□□□□ -0.67
POLR2J3-215ENST00000511313 SMCO2A6NFE2 343 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 MARCKSP29966 332 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 ME1P48163 572 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 PPIGQ13427 754 aaKnown RBP eCLIP10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 FANCBQ8NB91 859 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 NOC3LQ8WTT2 800 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 DNM3Q9UQ16 869 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 MSNP26038 577 aaKnown RBP10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 DGKDQ16760 1214 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 RUFY3Q7L099 469 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 TIPINQ9BVW5 301 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 SMARCAD1Q9H4L7 1026 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 DOT1LQ8TEK3 1739 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 ASAP2O43150 1006 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 RPS6KB1P23443 525 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 MAP2K5Q13163 448 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 IRF5Q13568 498 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 NBPF9Q3BBW0 867 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 EPHA10Q5JZY3 1008 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 VPS36Q86VN1 386 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 FERMT1Q9BQL6 677 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 MTG1Q9BT17 334 aaPredicted RBP10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 STARD7Q9NQZ5 370 aa10.87□□□□□ -0.67
POLR2J3-215ENST00000511313 SCG2P13521 617 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 RAG1P15918 1043 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 DSG3P32926 999 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 TNFAIP2Q03169 654 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 ANKLE1Q8NAG6 615 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 FIBPO43427 364 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 TGFB3P10600 412 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 PTPROQ16827 1216 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 PTF1AQ7RTS3 328 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 ELMOD1Q8N336 334 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 SMARCE1Q969G3 411 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 EHD2Q9NZN4 543 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 HSPA1AP0DMV8 641 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 HSPA1BP0DMV9 641 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 YBX3P16989 372 aaKnown RBP eCLIP10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 CYP4F22Q6NT55 531 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 METTL23Q86XA0 190 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 RMDN3Q96TC7 470 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 PHACTR2O75167 634 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 PRDM1O75626 825 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 FGAP02671 866 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 SFPQP23246 707 aaKnown RBP eCLIP10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 PPP1R9AQ9ULJ8 1098 aa10.86□□□□□ -0.67
POLR2J3-215ENST00000511313 CTDSPL2Q05D32 466 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 FAM47AQ5JRC9 791 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 TATDN1Q6P1N9 297 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 FAM81BQ96LP2 452 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 ZNHIT6Q9NWK9 470 aaKnown RBP10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 ANAPC4Q9UJX5 808 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 PLA2G6O60733 806 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 PAX3P23760 479 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 SMC1AQ14683 1233 aaKnown RBP10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 NUDT18Q6ZVK8 323 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 DRC7Q8IY82 874 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 MCPH1Q8NEM0 835 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 GOLGA1Q92805 767 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 PKD1L3Q7Z443 1732 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 RASSF10A6NK89 507 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 SLC27A2O14975 620 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 IBSPP21815 317 aaPredicted RBP10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 VGLL4Q14135 290 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 MIS12Q9H081 205 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 MTMR4Q9NYA4 1195 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 AAK1Q2M2I8 961 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 IFNL1Q8IU54 200 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 RIOX2Q8IUF8 465 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 TRPM4Q8TD43 1214 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 FAM20AQ96MK3 541 aa10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 GAS2L1Q99501 681 aaPredicted RBP10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 GCOM2Q9BZD3 368 aaPredicted RBP10.85□□□□□ -0.67
POLR2J3-215ENST00000511313 NRAPQ86VF7 1730 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 E7EWF7 191 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 GRM4Q14833 912 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 KIAA1841Q6NSI8 718 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 NEK8Q86SG6 692 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 ANKRD13CQ8N6S4 541 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 DACT1Q9NYF0 836 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 LARSQ9P2J5 1176 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 WDR64B1ANS9 1081 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 EIF3JO75822 258 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 NEBLO76041 1014 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 C6orf222P0C671 652 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 PTPRAP18433 802 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 PHKA2P46019 1235 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 ERVK-9P63128 1117 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 ERVK-24P63145 666 aa10.84□□□□□ -0.67
POLR2J3-215ENST00000511313 TBC1D8BQ0IIM8 1120 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms