RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 EID1Q9Y6B2 187 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 CAPN6Q9Y6Q1 641 aa7.45□□□□□ -1.22
HMGB1P47-201ENST00000511281 SHISA3A0PJX4 238 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 DHX15O43143 795 aaKnown RBP7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 ZEB2O60315 1214 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 ALDH1L1O75891 902 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 RASGRP1O95267 797 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 THBDP07204 575 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 FAM87AP0C7U9 286 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 JMJD7P0C870 316 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 RXRBP28702 533 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 ECI1P42126 302 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 GUCY2FP51841 1108 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 GPR85P60893 370 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 CDCA2Q69YH5 1023 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 CWF19L1Q69YN2 538 aaKnown RBP7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 BEND4Q6ZU67 534 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 USP53Q70EK8 1073 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 UBE2R2Q712K3 238 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 ASPSCR1Q9BZE9 553 aa7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 GEMIN8Q9NWZ8 242 aaKnown RBP7.44□□□□□ -1.22
HMGB1P47-201ENST00000511281 WNT9AO14904 365 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 NOP2P46087 812 aaKnown RBP7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 NEK4P51957 841 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 TNK2Q07912 1038 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 STAT4Q14765 748 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 TTF1Q15361 905 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 CFAP100Q494V2 611 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 ZAR1Q86SH2 424 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 SPATS2Q86XZ4 545 aaKnown RBP7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 PPIL6Q8IXY8 311 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 IFNL3Q8IZI9 196 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 MFSD4AQ8N468 514 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 WDR66Q8TBY9 1149 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 FCRL3Q96P31 734 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 PCGF6Q9BYE7 350 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 PUS7LQ9H0K6 701 aaKnown RBP7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 ADAMTS8Q9UP79 889 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 TRAF6Q9Y4K3 522 aa7.43□□□□□ -1.22
HMGB1P47-201ENST00000511281 C2orf71A6NGG8 1288 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 STXBP3O00186 592 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 ARNTLO00327 626 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 KPNA6O60684 536 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 ZNF205O95201 554 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 STRN3Q13033 797 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 KCNAB2Q13303 367 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 NFKBIBQ15653 356 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 NFE2Q16621 373 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 DPY19L1Q2PZI1 675 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 EEF1DP3Q658K8 133 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 CRTC3Q6UUV7 619 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 FMNL3Q8IVF7 1028 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 SCARF2Q96GP6 870 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 TTC1Q99614 292 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 SLC12A9Q9BXP2 914 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 DUSP15Q9H1R2 295 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 MKNK2Q9HBH9 465 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 SLC5A4Q9NY91 659 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 MINPP1Q9UNW1 487 aa7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 APOBEC2Q9Y235 224 aaKnown RBP7.42□□□□□ -1.22
HMGB1P47-201ENST00000511281 PRR33A8MZF0 331 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 MEFVO15553 781 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 CBX7O95931 251 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 APPP05067 770 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 CD3EP07766 207 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 VAV1P15498 845 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 LTBRP36941 435 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 CYP27C1Q4G0S4 372 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 ABHD17CQ6PCB6 329 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 KCNT2Q6UVM3 1135 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 DDX53Q86TM3 631 aaKnown RBP7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 LINC00116Q8NCU8 138 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 OR2W6PQ8NHA6 318 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 C8orf48Q96LL4 319 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 MMP19Q99542 508 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 PHF20Q9BVI0 1012 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 IFT22Q9H7X7 185 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 PCDHA9Q9Y5H5 950 aa7.41□□□□□ -1.22
HMGB1P47-201ENST00000511281 K7ESF4 209 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 CBX4O00257 560 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 F2P00734 622 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 GUCY1A3Q02108 690 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 CYP27A1Q02318 531 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 MCL1Q07820 350 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 MTMR1Q13613 665 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 FAM50AQ14320 339 aaKnown RBP7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 LBX2Q6XYB7 198 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 LHFPL2Q6ZUX7 228 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 CCDC103Q8IW40 242 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 TCTN2Q96GX1 697 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 WNK4Q96J92 1243 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 CELF4Q9BZC1 486 aaKnown RBP7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 TRIT1Q9H3H1 467 aaKnown RBP7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 KCNF1Q9H3M0 494 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 TCEAL9Q9UHQ7 104 aa7.4□□□□□ -1.22
HMGB1P47-201ENST00000511281 TRBV23OR9-2A0A075B6M9 112 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 CKMP06732 381 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 IFNGR1P15260 489 aa7.39□□□□□ -1.23
HMGB1P47-201ENST00000511281 ENDOUP21128 410 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms