RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RAB11FIP4Q86YS3 637 aa18.12■□□□□ 0.49
SH3TC1-220ENST00000511002 DPF3Q92784 378 aa18.12■□□□□ 0.49
SH3TC1-220ENST00000511002 BRF1Q92994 677 aa18.12■□□□□ 0.49
SH3TC1-220ENST00000511002 TBC1D32Q96NH3 1257 aa18.12■□□□□ 0.49
SH3TC1-220ENST00000511002 RNF146Q9NTX7 359 aa18.12■□□□□ 0.49
SH3TC1-220ENST00000511002 SLC5A4Q9NY91 659 aa18.12■□□□□ 0.49
SH3TC1-220ENST00000511002 BRPF3Q9ULD4 1205 aa18.12■□□□□ 0.49
SH3TC1-220ENST00000511002 PFASO15067 1338 aa18.12■□□□□ 0.49
SH3TC1-220ENST00000511002 H0YGN5 161 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 DDAH1O94760 285 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 ALAS1P13196 640 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 RXRAP19793 462 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 APOBRQ0VD83 1088 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 TROAPQ12815 778 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 TOB2Q14106 344 aaPredicted RBP18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 NECAB2Q7Z6G3 386 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 ANKLE1Q8NAG6 615 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 CHST13Q8NET6 341 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 DDX11Q96FC9 970 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 TINF2Q9BSI4 451 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 AGXT2Q9BYV1 514 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 RANBP17Q9H2T7 1088 aaKnown RBP18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 PDRG1Q9NUG6 133 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 PCDH10Q9P2E7 1040 aa18.11■□□□□ 0.49
SH3TC1-220ENST00000511002 KLF18A0A0U1RQI7 1052 aa18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 FDX1P10109 184 aa18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 CNTN2Q02246 1040 aa18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 GRM4Q14833 912 aa18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 APOA5Q6Q788 366 aa18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 TMTC2Q8N394 836 aa18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 NUP133Q8WUM0 1156 aa18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 LENG1Q96BZ8 264 aaPredicted RBP18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 HTATIP2Q9BUP3 242 aa18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 A1CFQ9NQ94 594 aaKnown RBP18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 DIS3Q9Y2L1 958 aaKnown RBP18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 SLC12A7Q9Y666 1083 aa18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 DDX49Q9Y6V7 483 aaKnown RBP18.1■□□□□ 0.49
SH3TC1-220ENST00000511002 SEPT4O43236 478 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 SNAI1O95863 264 aaPredicted RBP18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 PARP1P09874 1014 aaKnown RBP18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 COL6A1P12109 1028 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 ASPRV1Q53RT3 343 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 MICU3Q86XE3 530 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 CCDC144CPQ8IYA2 1237 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 ANKRD35Q8N283 1001 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 STAG2Q8N3U4 1231 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 FBXL16Q8N461 479 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 TRERF1Q96PN7 1200 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 LARP6Q9BRS8 491 aaKnown RBP18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 UBA5Q9GZZ9 404 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 C11orf49Q9H6J7 331 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 ACAD9Q9H845 621 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 FBXO40Q9UH90 709 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 MAD2L2Q9UI95 211 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 CCPG1Q9ULG6 757 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 MYH6P13533 1939 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 CEP290O15078 2479 aa18.09■□□□□ 0.49
SH3TC1-220ENST00000511002 ASTN1O14525 1302 aa18.08■□□□□ 0.49
SH3TC1-220ENST00000511002 ICAM1P05362 532 aa18.08■□□□□ 0.48
SH3TC1-220ENST00000511002 ZNF865P0CJ78 1059 aaPredicted RBP18.08■□□□□ 0.48
SH3TC1-220ENST00000511002 CAPN2P17655 700 aa18.08■□□□□ 0.48
SH3TC1-220ENST00000511002 NEK4P51957 841 aa18.08■□□□□ 0.48
SH3TC1-220ENST00000511002 GPATCH4Q5T3I0 446 aaKnown RBP18.08■□□□□ 0.48
SH3TC1-220ENST00000511002 PURBQ96QR8 312 aaKnown RBP18.08■□□□□ 0.48
SH3TC1-220ENST00000511002 NAP1L2Q9ULW6 460 aaPredicted RBP18.08■□□□□ 0.48
SH3TC1-220ENST00000511002 PALM3A6NDB9 673 aaPredicted RBP18.07■□□□□ 0.48
SH3TC1-220ENST00000511002 SOWAHBA6NEL2 793 aa18.07■□□□□ 0.48
SH3TC1-220ENST00000511002 GOLGA8BA8MQT2 603 aa18.07■□□□□ 0.48
SH3TC1-220ENST00000511002 AK2P54819 239 aa18.07■□□□□ 0.48
SH3TC1-220ENST00000511002 GJC2Q5T442 439 aaPredicted RBP18.07■□□□□ 0.48
SH3TC1-220ENST00000511002 FAM133AQ8N9E0 248 aa18.07■□□□□ 0.48
SH3TC1-220ENST00000511002 BAZ2BQ9UIF8 2168 aaKnown RBP18.07■□□□□ 0.48
SH3TC1-220ENST00000511002 LRRC37A2A6NM11 1700 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 KLRF2D3W0D1 207 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 NFIBO00712 420 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 ZBTB43O43298 467 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 MSCO60682 206 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 CALM1P0DP23 149 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 CALM2P0DP24 149 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 CALM3P0DP25 149 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 SLC35G1Q2M3R5 365 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 TKFCQ3LXA3 575 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 MAMDC4Q6UXC1 1216 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 SYNE3Q6ZMZ3 975 aa18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 CTCFLQ8NI51 663 aaPredicted RBP18.06■□□□□ 0.48
SH3TC1-220ENST00000511002 GOLGA8AA7E2F4 631 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 POTEB2H3BUK9 544 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 ADCY6O43306 1168 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 PLEKHA8P1O95397 391 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 IRX5P78411 483 aaPredicted RBP18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 LRRC26Q2I0M4 334 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 NSMFQ6X4W1 530 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 NOL8Q76FK4 1167 aaKnown RBP18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 ARMCX2Q7L311 632 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 ZNF467Q7Z7K2 595 aaPredicted RBP18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 CLEC4DQ8WXI8 215 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 MAP3K14Q99558 947 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 KATNBL1Q9H079 304 aa18.05■□□□□ 0.48
SH3TC1-220ENST00000511002 ALDH8A1Q9H2A2 487 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms