RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 LLGL2Q6P1M3 1020 aa10.97□□□□□ -0.65
USP53-207ENST00000510852 LILRB2Q8N423 598 aa10.97□□□□□ -0.65
USP53-207ENST00000510852 NLRP7Q8WX94 980 aa10.97□□□□□ -0.65
USP53-207ENST00000510852 MASTLQ96GX5 879 aa10.97□□□□□ -0.65
USP53-207ENST00000510852 MINPP1Q9UNW1 487 aa10.97□□□□□ -0.65
USP53-207ENST00000510852 AKAP10O43572 662 aa10.96□□□□□ -0.65
USP53-207ENST00000510852 PPFIA2O75334 1257 aa10.96□□□□□ -0.65
USP53-207ENST00000510852 PDE8BO95263 885 aa10.96□□□□□ -0.65
USP53-207ENST00000510852 MX1P20591 662 aa10.96□□□□□ -0.65
USP53-207ENST00000510852 PTGER2P43116 358 aa10.96□□□□□ -0.65
USP53-207ENST00000510852 HLTFQ14527 1009 aaKnown RBP eCLIP10.96□□□□□ -0.65
USP53-207ENST00000510852 INF2Q27J81 1249 aa10.96□□□□□ -0.65
USP53-207ENST00000510852 ZNF354CQ86Y25 554 aa10.96□□□□□ -0.65
USP53-207ENST00000510852 TLR7Q9NYK1 1049 aaKnown RBP10.96□□□□□ -0.65
USP53-207ENST00000510852 PCDHGA4Q9Y5G9 962 aa10.96□□□□□ -0.65
USP53-207ENST00000510852 MORC2Q9Y6X9 1032 aaPredicted RBP10.96□□□□□ -0.65
USP53-207ENST00000510852 STXBP3O00186 592 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 TAF5LO75529 589 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 CHRNA5P30532 468 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 RENBPP51606 427 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 RCAN1P53805 252 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 PDE1AP54750 535 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 TIMM10P62072 90 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 MTMR3Q13615 1198 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 MYBPC3Q14896 1274 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 ARMC4Q5T2S8 1044 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 ENAHQ8N8S7 591 aaPredicted RBP10.96□□□□□ -0.66
USP53-207ENST00000510852 PDRG1Q9NUG6 133 aa10.96□□□□□ -0.66
USP53-207ENST00000510852 TAF1P21675 1872 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 A0A1B0GUL7 405 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 ALDH1B1P30837 517 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 QPCTQ16769 361 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 GALNT17Q6IS24 598 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 SLC51AQ86UW1 340 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 DDX42Q86XP3 938 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP53-207ENST00000510852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP53-207ENST00000510852 FAM81BQ96LP2 452 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 KCTD5Q9NXV2 234 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 STAP2Q9UGK3 403 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 DBNLQ9UJU6 430 aaKnown RBP10.95□□□□□ -0.66
USP53-207ENST00000510852 ZNF609O15014 1411 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 SPTLC2O15270 562 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 KIAA0754O94854 1291 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 VCAM1P19320 739 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 PDE1CQ14123 709 aaPredicted RBP10.95□□□□□ -0.66
USP53-207ENST00000510852 ATP2B3Q16720 1220 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 TIFAQ96CG3 184 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 TRIM11Q96F44 468 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 DBNDD2Q9BQY9 259 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 OSBPL3Q9H4L5 887 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 CNNM2Q9H8M5 875 aa10.95□□□□□ -0.66
USP53-207ENST00000510852 HMX1Q9NP08 348 aaPredicted RBP10.95□□□□□ -0.66
USP53-207ENST00000510852 A0A0B4J203 849 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 RASSF10A6NK89 507 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 SNAP23O00161 211 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 PPEF1O14829 653 aaPredicted RBP10.94□□□□□ -0.66
USP53-207ENST00000510852 KCNV1Q6PIU1 500 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 FIP1L1Q6UN15 594 aaKnown RBP10.94□□□□□ -0.66
USP53-207ENST00000510852 CATSPER4Q7RTX7 472 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 TMC4Q7Z404 712 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 TEX9Q8N6V9 391 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 CFAP45Q9UL16 551 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 SLC5A1P13866 664 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 FGFR2P21802 821 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 PLA2G4AP47712 749 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 SWSAP1Q6NVH7 229 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 MZT2AQ6P582 158 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 SYNE3Q6ZMZ3 975 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 GSDMBQ8TAX9 411 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 DEPDC7Q96QD5 511 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 ANKRD2Q9GZV1 360 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 COL11A2P13942 1736 aaPredicted RBP10.94□□□□□ -0.66
USP53-207ENST00000510852 SPEF2Q9C093 1822 aa10.94□□□□□ -0.66
USP53-207ENST00000510852 CCDC196A0A1B0GTZ2 297 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 TRIM64A6NGJ6 449 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 TRIM64BA6NI03 449 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 DPEP1P16444 411 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 ADORA1P30542 326 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 NSUN2Q08J23 767 aaKnown RBP eCLIP10.93□□□□□ -0.66
USP53-207ENST00000510852 SHROOM1Q2M3G4 852 aaPredicted RBP10.93□□□□□ -0.66
USP53-207ENST00000510852 HIBCHQ6NVY1 386 aaPredicted RBP10.93□□□□□ -0.66
USP53-207ENST00000510852 LILRB1Q8NHL6 650 aaPredicted RBP10.93□□□□□ -0.66
USP53-207ENST00000510852 ATXN2LQ8WWM7 1075 aaKnown RBP10.93□□□□□ -0.66
USP53-207ENST00000510852 LPIN2Q92539 896 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 XAGE2Q96GT9 111 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 IQCGQ9H095 443 aaKnown RBP10.93□□□□□ -0.66
USP53-207ENST00000510852 ZNF408Q9H9D4 720 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 SPON1Q9HCB6 807 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 MED4Q9NPJ6 270 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 ECHDC1Q9NTX5 307 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 FBXL5Q9UKA1 691 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 PCDHGB3Q9Y5G1 929 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 TTC41PQ6P2S7 1318 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 A0A0G2JLW4 131 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 FAM170AA1A519 330 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 WTIPA6NIX2 430 aaPredicted RBP10.93□□□□□ -0.66
USP53-207ENST00000510852 BTF3P20290 206 aaKnown RBP10.93□□□□□ -0.66
USP53-207ENST00000510852 CNGA1P29973 690 aa10.93□□□□□ -0.66
USP53-207ENST00000510852 TTC22Q5TAA0 569 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms