RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 ATN1P54259 1190 aaPredicted RBP21.72■■□□□ 1.07
LSM6-206ENST00000510331 CDC37Q16543 378 aaPredicted RBP21.72■■□□□ 1.07
LSM6-206ENST00000510331 ASPRV1Q53RT3 343 aa21.72■■□□□ 1.07
LSM6-206ENST00000510331 SLC30A10Q6XR72 485 aa21.72■■□□□ 1.07
LSM6-206ENST00000510331 RALYLQ86SE5 291 aaKnown RBP21.72■■□□□ 1.07
LSM6-206ENST00000510331 ARRDC4Q8NCT1 418 aa21.72■■□□□ 1.07
LSM6-206ENST00000510331 KATNBL1Q9H079 304 aa21.72■■□□□ 1.07
LSM6-206ENST00000510331 WDR19Q8NEZ3 1342 aa21.72■■□□□ 1.07
LSM6-206ENST00000510331 SYNRGQ9UMZ2 1314 aa21.72■■□□□ 1.07
LSM6-206ENST00000510331 LTBP2Q14767 1821 aa21.71■■□□□ 1.07
LSM6-206ENST00000510331 ACVR2BQ13705 512 aa21.71■■□□□ 1.07
LSM6-206ENST00000510331 CLEC4DQ8WXI8 215 aa21.71■■□□□ 1.07
LSM6-206ENST00000510331 SENP2Q9HC62 589 aa21.71■■□□□ 1.07
LSM6-206ENST00000510331 LAMA3Q16787 3333 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 ADAMTS4O75173 837 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 PARP1P09874 1014 aaKnown RBP21.7■■□□□ 1.06
LSM6-206ENST00000510331 ANTXR2P58335 489 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 USH1GQ495M9 461 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 CHST3Q7LGC8 479 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 NCOA7Q8NI08 942 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 CCDC136Q96JN2 1154 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 PRO3102Q9H379 93 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 ABHD16BQ9H3Z7 469 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 RBM27Q9P2N5 1060 aaKnown RBP21.7■■□□□ 1.06
LSM6-206ENST00000510331 FAM184BQ9ULE4 1060 aa21.7■■□□□ 1.06
LSM6-206ENST00000510331 PTPDC1A2A3K4 754 aa21.69■■□□□ 1.06
LSM6-206ENST00000510331 ADCYAP1R1P41586 468 aa21.69■■□□□ 1.06
LSM6-206ENST00000510331 BAATQ14032 418 aaPredicted RBP21.69■■□□□ 1.06
LSM6-206ENST00000510331 CCDC144BQ3MJ40 725 aa21.69■■□□□ 1.06
LSM6-206ENST00000510331 KIAA1211Q6ZU35 1233 aa21.69■■□□□ 1.06
LSM6-206ENST00000510331 MB21D2Q8IYB1 491 aaPredicted RBP21.69■■□□□ 1.06
LSM6-206ENST00000510331 ADGRF4Q8IZF3 695 aa21.69■■□□□ 1.06
LSM6-206ENST00000510331 STAG2Q8N3U4 1231 aa21.69■■□□□ 1.06
LSM6-206ENST00000510331 FERMT2Q96AC1 680 aa21.69■■□□□ 1.06
LSM6-206ENST00000510331 ANO2Q9NQ90 1003 aa21.69■■□□□ 1.06
LSM6-206ENST00000510331 MYADML2A6NDP7 307 aa21.68■■□□□ 1.06
LSM6-206ENST00000510331 IFIT3O14879 490 aaKnown RBP21.68■■□□□ 1.06
LSM6-206ENST00000510331 DHX16O60231 1041 aaKnown RBP21.68■■□□□ 1.06
LSM6-206ENST00000510331 COL9A3Q14050 684 aaPredicted RBP21.68■■□□□ 1.06
LSM6-206ENST00000510331 FBXO16Q8IX29 292 aaPredicted RBP21.68■■□□□ 1.06
LSM6-206ENST00000510331 PHF24Q9UPV7 400 aa21.68■■□□□ 1.06
LSM6-206ENST00000510331 ASB14A6NK59 587 aa21.67■■□□□ 1.06
LSM6-206ENST00000510331 CALML3P27482 149 aa21.67■■□□□ 1.06
LSM6-206ENST00000510331 RTP1P59025 263 aa21.67■■□□□ 1.06
LSM6-206ENST00000510331 IRX5P78411 483 aaPredicted RBP21.67■■□□□ 1.06
LSM6-206ENST00000510331 QRICH1Q2TAL8 776 aa21.67■■□□□ 1.06
LSM6-206ENST00000510331 RNF180Q86T96 592 aa21.67■■□□□ 1.06
LSM6-206ENST00000510331 BAZ2BQ9UIF8 2168 aaKnown RBP21.66■■□□□ 1.06
LSM6-206ENST00000510331 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.66■■□□□ 1.06
LSM6-206ENST00000510331 SLC27A2O14975 620 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 SLC34A2O95436 690 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 PTGS1P23219 599 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 ALDH5A1P51649 535 aaPredicted RBP21.66■■□□□ 1.06
LSM6-206ENST00000510331 WTAPQ15007 396 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 TRIM60Q495X7 471 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 RNF207Q6ZRF8 634 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 EEPD1Q7L9B9 569 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 JMJD4Q9H9V9 463 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 MAD2L2Q9UI95 211 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 PNMA2Q9UL42 364 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 ATP11BQ9Y2G3 1177 aa21.66■■□□□ 1.06
LSM6-206ENST00000510331 A0A1W2PQ45 241 aaPredicted RBP21.65■■□□□ 1.06
LSM6-206ENST00000510331 A0A1W2PQY0 241 aa21.65■■□□□ 1.06
LSM6-206ENST00000510331 ERICH2A1L162 156 aa21.65■■□□□ 1.06
LSM6-206ENST00000510331 DUSP11O75319 330 aaKnown RBP21.65■■□□□ 1.06
LSM6-206ENST00000510331 RPS6P62753 249 aaKnown RBP21.65■■□□□ 1.06
LSM6-206ENST00000510331 GRM4Q14833 912 aa21.65■■□□□ 1.06
LSM6-206ENST00000510331 SNX17Q15036 470 aa21.65■■□□□ 1.06
LSM6-206ENST00000510331 SLC35G1Q2M3R5 365 aa21.65■■□□□ 1.06
LSM6-206ENST00000510331 TMEM67Q5HYA8 995 aa21.65■■□□□ 1.06
LSM6-206ENST00000510331 GPHNQ9NQX3 736 aaPredicted RBP21.65■■□□□ 1.06
LSM6-206ENST00000510331 ABCB11O95342 1321 aa21.64■■□□□ 1.05
LSM6-206ENST00000510331 CDC45O75419 566 aa21.64■■□□□ 1.05
LSM6-206ENST00000510331 MAGEA10P43363 369 aaPredicted RBP21.64■■□□□ 1.05
LSM6-206ENST00000510331 FXR1P51114 621 aaKnown RBP eCLIP21.64■■□□□ 1.05
LSM6-206ENST00000510331 SART3Q15020 963 aaKnown RBP21.64■■□□□ 1.05
LSM6-206ENST00000510331 CREB3L3Q68CJ9 461 aa21.64■■□□□ 1.05
LSM6-206ENST00000510331 SLC39A5Q6ZMH5 540 aa21.64■■□□□ 1.05
LSM6-206ENST00000510331 MORC4Q8TE76 937 aa21.64■■□□□ 1.05
LSM6-206ENST00000510331 UPF3AQ9H1J1 476 aaKnown RBP21.64■■□□□ 1.05
LSM6-206ENST00000510331 VAT1LQ9HCJ6 419 aa21.64■■□□□ 1.05
LSM6-206ENST00000510331 PDGFCQ9NRA1 345 aa21.64■■□□□ 1.05
LSM6-206ENST00000510331 KLRF2D3W0D1 207 aa21.63■■□□□ 1.05
LSM6-206ENST00000510331 NEFLP07196 543 aa21.63■■□□□ 1.05
LSM6-206ENST00000510331 C6orf222P0C671 652 aaPredicted RBP21.63■■□□□ 1.05
LSM6-206ENST00000510331 KLHDC9Q8NEP7 349 aa21.63■■□□□ 1.05
LSM6-206ENST00000510331 GDF15Q99988 308 aa21.63■■□□□ 1.05
LSM6-206ENST00000510331 LY9Q9HBG7 655 aa21.63■■□□□ 1.05
LSM6-206ENST00000510331 ADD3Q9UEY8 706 aaKnown RBP21.63■■□□□ 1.05
LSM6-206ENST00000510331 SZT2Q5T011 3432 aa21.63■■□□□ 1.05
LSM6-206ENST00000510331 PALM3A6NDB9 673 aaPredicted RBP21.62■■□□□ 1.05
LSM6-206ENST00000510331 PRC1O43663 620 aa21.62■■□□□ 1.05
LSM6-206ENST00000510331 PPP1R11O60927 126 aaPredicted RBP21.62■■□□□ 1.05
LSM6-206ENST00000510331 CST5P28325 142 aaPredicted RBP21.62■■□□□ 1.05
LSM6-206ENST00000510331 ACLYP53396 1101 aa21.62■■□□□ 1.05
LSM6-206ENST00000510331 TROAPQ12815 778 aa21.62■■□□□ 1.05
LSM6-206ENST00000510331 NECTIN1Q15223 517 aa21.62■■□□□ 1.05
LSM6-206ENST00000510331 CCSAPQ6IQ19 270 aaPredicted RBP21.62■■□□□ 1.05
LSM6-206ENST00000510331 FBXO11Q86XK2 927 aa21.62■■□□□ 1.05
LSM6-206ENST00000510331 IGDCC4Q8TDY8 1250 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms