RNA–Protein interactions for RNA: ENST00000509861.1

CSF1R-204, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 886 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-204ENST00000509861 CCL5P13501 91 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 TRIM32Q13049 653 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 MTFR1Q15390 333 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 MFSD14CQ5VZR4 134 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 OLFML2BQ68BL8 750 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 RAB11FIP4Q86YS3 637 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 CCDC144CPQ8IYA2 1237 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 BRF1Q92994 677 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 IL17RAQ96F46 866 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 MAML3Q96JK9 1138 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 SPZ1Q9BXG8 430 aa13.77□□□□□ -0.21
CSF1R-204ENST00000509861 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
CSF1R-204ENST00000509861 A1CFQ9NQ94 594 aaKnown RBP13.77□□□□□ -0.21
CSF1R-204ENST00000509861 ZNFX1Q9P2E3 1918 aaKnown RBP13.76□□□□□ -0.21
CSF1R-204ENST00000509861 ABCB11O95342 1321 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 NFIBO00712 420 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 PRKAR2AP13861 404 aaKnown RBP13.76□□□□□ -0.21
CSF1R-204ENST00000509861 RCAN1P53805 252 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 APOBRQ0VD83 1088 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 USH1GQ495M9 461 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 MAP3K21Q5TCX8 1036 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 NSMFQ6X4W1 530 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 FBXO11Q86XK2 927 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 PIGSQ96S52 555 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 TMEM106CQ9BVX2 250 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 AMNQ9BXJ7 453 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 RNF208Q9H0X6 261 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 UNC93B1Q9H1C4 597 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 CYP39A1Q9NYL5 469 aa13.76□□□□□ -0.21
CSF1R-204ENST00000509861 RPTORQ8N122 1335 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 POTEB2H3BUK9 544 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 PPP1R11O60927 126 aaPredicted RBP13.75□□□□□ -0.21
CSF1R-204ENST00000509861 PLEKHA8P1O95397 391 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 CYP2C19P33261 490 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 SOX10P56693 466 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 EVCP57679 992 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 CACNB2Q08289 660 aaPredicted RBP13.75□□□□□ -0.21
CSF1R-204ENST00000509861 RTN1Q16799 776 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 IFFO2Q5TF58 517 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 TMTC3Q6ZXV5 915 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 ZNF467Q7Z7K2 595 aaPredicted RBP13.75□□□□□ -0.21
CSF1R-204ENST00000509861 HOMER1Q86YM7 354 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 SRBD1Q8N5C6 995 aaKnown RBP13.75□□□□□ -0.21
CSF1R-204ENST00000509861 FAM133AQ8N9E0 248 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 HMX1Q9NP08 348 aaPredicted RBP13.75□□□□□ -0.21
CSF1R-204ENST00000509861 PDRG1Q9NUG6 133 aa13.75□□□□□ -0.21
CSF1R-204ENST00000509861 RBM28Q9NW13 759 aaKnown RBP13.75□□□□□ -0.21
CSF1R-204ENST00000509861 NAP1L2Q9ULW6 460 aaPredicted RBP13.75□□□□□ -0.21
CSF1R-204ENST00000509861 SMCHD1A6NHR9 2005 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 GOLGA8AA7E2F4 631 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 GOLGA8BA8MQT2 603 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 GJB1P08034 283 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 CNTN2Q02246 1040 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 TRAF1Q13077 416 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 BAATQ14032 418 aaPredicted RBP13.74□□□□□ -0.21
CSF1R-204ENST00000509861 TOB2Q14106 344 aaPredicted RBP13.74□□□□□ -0.21
CSF1R-204ENST00000509861 PPP2R5BQ15173 497 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 CMTR1Q8N1G2 835 aaKnown RBP13.74□□□□□ -0.21
CSF1R-204ENST00000509861 MSL3Q8N5Y2 521 aaKnown RBP13.74□□□□□ -0.21
CSF1R-204ENST00000509861 RGS22Q8NE09 1264 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
CSF1R-204ENST00000509861 FGD4Q96M96 766 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 TINF2Q9BSI4 451 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 MAF1Q9H063 256 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.74□□□□□ -0.21
CSF1R-204ENST00000509861 PAK6Q9NQU5 681 aaPredicted RBP13.74□□□□□ -0.21
CSF1R-204ENST00000509861 FAM217BQ9NTX9 383 aaPredicted RBP13.74□□□□□ -0.21
CSF1R-204ENST00000509861 MRPL11Q9Y3B7 192 aaKnown RBP13.74□□□□□ -0.21
CSF1R-204ENST00000509861 PCDHA1Q9Y5I3 950 aa13.74□□□□□ -0.21
CSF1R-204ENST00000509861 HTTP42858 3142 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 CCDC196A0A1B0GTZ2 297 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 PTPDC1A2A3K4 754 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 POTEFA5A3E0 1075 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 METAP2P50579 478 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSF1R-204ENST00000509861 MAMDC4Q6UXC1 1216 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 RNF207Q6ZRF8 634 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 MCF2L2Q86YR7 1114 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 CCDC82Q8N4S0 544 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 PIBF1Q8WXW3 757 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 SEC63Q9UGP8 760 aaKnown RBP13.73□□□□□ -0.21
CSF1R-204ENST00000509861 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 PLXNA1Q9UIW2 1896 aa13.73□□□□□ -0.21
CSF1R-204ENST00000509861 NID2Q14112 1375 aa13.72□□□□□ -0.21
CSF1R-204ENST00000509861 SYNGAP1Q96PV0 1343 aa13.72□□□□□ -0.21
CSF1R-204ENST00000509861 SOWAHBA6NEL2 793 aa13.72□□□□□ -0.21
CSF1R-204ENST00000509861 CYBAP13498 195 aa13.72□□□□□ -0.21
CSF1R-204ENST00000509861 PDIA3P30101 505 aaKnown RBP13.72□□□□□ -0.21
CSF1R-204ENST00000509861 CDC27P30260 824 aa13.72□□□□□ -0.21
CSF1R-204ENST00000509861 CCND3P30281 292 aaPredicted RBP13.72□□□□□ -0.21
CSF1R-204ENST00000509861 RPS6P62753 249 aaKnown RBP13.72□□□□□ -0.21
CSF1R-204ENST00000509861 SLC30A10Q6XR72 485 aa13.72□□□□□ -0.21
CSF1R-204ENST00000509861 TRPV1Q8NER1 839 aa13.72□□□□□ -0.21
CSF1R-204ENST00000509861 DEFB118Q96PH6 123 aa13.72□□□□□ -0.21
CSF1R-204ENST00000509861 ALDH8A1Q9H2A2 487 aaPredicted RBP13.72□□□□□ -0.21
CSF1R-204ENST00000509861 BAZ2BQ9UIF8 2168 aaKnown RBP13.72□□□□□ -0.21
CSF1R-204ENST00000509861 MYH6P13533 1939 aa13.72□□□□□ -0.21
CSF1R-204ENST00000509861 RBBP6Q7Z6E9 1792 aaKnown RBP13.71□□□□□ -0.21
CSF1R-204ENST00000509861 ASB14A6NK59 587 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms