RNA–Protein interactions for RNA: ENST00000509751.1

HTT-207, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 723 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-207ENST00000509751 SMCHD1A6NHR9 2005 aa17.59■□□□□ 0.41
HTT-207ENST00000509751 DNAJC25-GNG10A0A024R161 153 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 CNGA1P29973 690 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 KIF5BP33176 963 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 APOBRQ0VD83 1088 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 PRAMEF19Q5SWL8 479 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 MAP3K21Q5TCX8 1036 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 OLFML2BQ68BL8 750 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 APOA5Q6Q788 366 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.4
HTT-207ENST00000509751 SGMS1Q86VZ5 419 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 FBXO11Q86XK2 927 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 BRF1Q92994 677 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 PIGSQ96S52 555 aa17.58■□□□□ 0.4
HTT-207ENST00000509751 UPF3BQ9BZI7 483 aaKnown RBP17.58■□□□□ 0.4
HTT-207ENST00000509751 CENPFP49454 3210 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 ZNFX1Q9P2E3 1918 aaKnown RBP17.57■□□□□ 0.4
HTT-207ENST00000509751 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 CYTH3O43739 400 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 GJB1P08034 283 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 CALM1P0DP23 149 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 CALM2P0DP24 149 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 CALM3P0DP25 149 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 BAATQ14032 418 aaPredicted RBP17.57■□□□□ 0.4
HTT-207ENST00000509751 SLC30A10Q6XR72 485 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 CCDC82Q8N4S0 544 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 TRPV1Q8NER1 839 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 U2AF1L4Q8WU68 220 aaKnown RBP17.57■□□□□ 0.4
HTT-207ENST00000509751 CLEC4DQ8WXI8 215 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 PURBQ96QR8 312 aaKnown RBP17.57■□□□□ 0.4
HTT-207ENST00000509751 PAK6Q9NQU5 681 aaPredicted RBP17.57■□□□□ 0.4
HTT-207ENST00000509751 CYP39A1Q9NYL5 469 aa17.57■□□□□ 0.4
HTT-207ENST00000509751 DDX49Q9Y6V7 483 aaKnown RBP17.57■□□□□ 0.4
HTT-207ENST00000509751 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
HTT-207ENST00000509751 PFASO15067 1338 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 ABCB11O95342 1321 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 GOLGA8BA8MQT2 603 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 ZBTB5O15062 677 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 ZBTB43O43298 467 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 PPP1R11O60927 126 aaPredicted RBP17.56■□□□□ 0.4
HTT-207ENST00000509751 CALML3P27482 149 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 C8orf34Q49A92 452 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 FANCBQ8NB91 859 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 SHISA4Q96DD7 197 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 FGD4Q96M96 766 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 MAP3K14Q99558 947 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 TINF2Q9BSI4 451 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 AMNQ9BXJ7 453 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 RIOX1Q9H6W3 641 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 PNMA2Q9UL42 364 aa17.56■□□□□ 0.4
HTT-207ENST00000509751 DIS3Q9Y2L1 958 aaKnown RBP17.56■□□□□ 0.4
HTT-207ENST00000509751 PLXNA1Q9UIW2 1896 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 hCG_1642624A0A1W2PR95 340 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 SOWAHBA6NEL2 793 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 GOLGA8AA7E2F4 631 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 IGHA2P01877 340 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 TFRCP02786 760 aaKnown RBP17.55■□□□□ 0.4
HTT-207ENST00000509751 CYBAP13498 195 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 ANO1Q5XXA6 986 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 RUFY3Q7L099 469 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 SRBD1Q8N5C6 995 aaKnown RBP17.55■□□□□ 0.4
HTT-207ENST00000509751 FAM133AQ8N9E0 248 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 MTMR8Q96EF0 704 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
HTT-207ENST00000509751 SGPL1O95470 568 aa17.54■□□□□ 0.4
HTT-207ENST00000509751 GJA8P48165 433 aa17.54■□□□□ 0.4
HTT-207ENST00000509751 GNAQP50148 359 aa17.54■□□□□ 0.4
HTT-207ENST00000509751 RTN1Q16799 776 aa17.54■□□□□ 0.4
HTT-207ENST00000509751 RNF207Q6ZRF8 634 aa17.54■□□□□ 0.4
HTT-207ENST00000509751 TMTC3Q6ZXV5 915 aa17.54■□□□□ 0.4
HTT-207ENST00000509751 TBC1D5Q92609 795 aa17.54■□□□□ 0.4
HTT-207ENST00000509751 RRP36Q96EU6 259 aaKnown RBP17.54■□□□□ 0.4
HTT-207ENST00000509751 LARP6Q9BRS8 491 aaKnown RBP17.54■□□□□ 0.4
HTT-207ENST00000509751 SPZ1Q9BXG8 430 aa17.54■□□□□ 0.4
HTT-207ENST00000509751 ZHX1Q9UKY1 873 aaPredicted RBP17.54■□□□□ 0.4
HTT-207ENST00000509751 PCDHA1Q9Y5I3 950 aa17.54■□□□□ 0.4
HTT-207ENST00000509751 ASTN1O14525 1302 aa17.53■□□□□ 0.4
HTT-207ENST00000509751 PNMA6FA0A0J9YX94 578 aa17.53■□□□□ 0.4
HTT-207ENST00000509751 RPS6P62753 249 aaKnown RBP17.53■□□□□ 0.4
HTT-207ENST00000509751 ARMCX2Q7L311 632 aa17.53■□□□□ 0.4
HTT-207ENST00000509751 LZTS2Q9BRK4 669 aa17.53■□□□□ 0.4
HTT-207ENST00000509751 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.53■□□□□ 0.4
HTT-207ENST00000509751 CNPY2Q9Y2B0 182 aa17.53■□□□□ 0.4
HTT-207ENST00000509751 MRPL11Q9Y3B7 192 aaKnown RBP17.53■□□□□ 0.4
HTT-207ENST00000509751 RBBP6Q7Z6E9 1792 aaKnown RBP17.53■□□□□ 0.4
HTT-207ENST00000509751 EIF5BO60841 1220 aaKnown RBP17.52■□□□□ 0.4
HTT-207ENST00000509751 SNAI1O95863 264 aaPredicted RBP17.52■□□□□ 0.4
HTT-207ENST00000509751 CFBP00751 764 aa17.52■□□□□ 0.4
HTT-207ENST00000509751 METAP2P50579 478 aaKnown RBP eCLIP17.52■□□□□ 0.4
HTT-207ENST00000509751 TOB2Q14106 344 aaPredicted RBP17.52■□□□□ 0.4
HTT-207ENST00000509751 ZNF467Q7Z7K2 595 aaPredicted RBP17.52■□□□□ 0.4
HTT-207ENST00000509751 TM6SF1Q9BZW5 370 aa17.52■□□□□ 0.4
HTT-207ENST00000509751 PDRG1Q9NUG6 133 aa17.52■□□□□ 0.4
HTT-207ENST00000509751 RBM28Q9NW13 759 aaKnown RBP17.52■□□□□ 0.4
HTT-207ENST00000509751 SEC63Q9UGP8 760 aaKnown RBP17.52■□□□□ 0.4
HTT-207ENST00000509751 DDX20Q9UHI6 824 aaKnown RBP17.52■□□□□ 0.4
HTT-207ENST00000509751 MYH6P13533 1939 aa17.52■□□□□ 0.4
HTT-207ENST00000509751 SYNGAP1Q96PV0 1343 aa17.51■□□□□ 0.39
HTT-207ENST00000509751 CDC27P30260 824 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms