RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 SEPT4O43236 478 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 REC8O95072 547 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 ICAM1P05362 532 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 ATN1P54259 1190 aaPredicted RBP10.15□□□□□ -0.78
SNCA-211ENST00000508895 OAZ1P54368 228 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 LRRC41Q15345 812 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 MAMDC4Q6UXC1 1216 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 CHRDL2Q6WN34 429 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 RASEFQ8IZ41 740 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 ADGRF4Q8IZF3 695 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 ANKRD35Q8N283 1001 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 CHST13Q8NET6 341 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 IGDCC4Q8TDY8 1250 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 DDX11Q96FC9 970 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 SENP6Q9GZR1 1112 aaPredicted RBP10.15□□□□□ -0.78
SNCA-211ENST00000508895 ACAD9Q9H845 621 aa10.15□□□□□ -0.78
SNCA-211ENST00000508895 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.15□□□□□ -0.78
SNCA-211ENST00000508895 LTBP2Q14767 1821 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 ADAMTS4O75173 837 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 HSPA4P34932 840 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 BAATQ14032 418 aaPredicted RBP10.14□□□□□ -0.79
SNCA-211ENST00000508895 NSMFQ6X4W1 530 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 ARMCX2Q7L311 632 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 CCDC144CPQ8IYA2 1237 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 KCNB2Q92953 911 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 FERMT2Q96AC1 680 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 MYL10Q9BUA6 226 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 LRRC2Q9BYS8 371 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 CNNM2Q9H8M5 875 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 JMJD4Q9H9V9 463 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 COL20A1Q9P218 1284 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 RBM27Q9P2N5 1060 aaKnown RBP10.14□□□□□ -0.79
SNCA-211ENST00000508895 MAD2L2Q9UI95 211 aa10.14□□□□□ -0.79
SNCA-211ENST00000508895 CTDP1Q9Y5B0 961 aaPredicted RBP10.14□□□□□ -0.79
SNCA-211ENST00000508895 SYNRGQ9UMZ2 1314 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 POTEB2H3BUK9 544 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
SNCA-211ENST00000508895 CYTH3O43739 400 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 EVI5O60447 810 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 SEC24BO95487 1268 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
SNCA-211ENST00000508895 COPB2P35606 906 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 ADCYAP1R1P41586 468 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 NT5C2P49902 561 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 ACVR2BQ13705 512 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 CDC37Q16543 378 aaPredicted RBP10.13□□□□□ -0.79
SNCA-211ENST00000508895 QRICH1Q2TAL8 776 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 ADCK5Q3MIX3 580 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 USH1GQ495M9 461 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 PPP4R3BQ5MIZ7 849 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 CCSAPQ6IQ19 270 aaPredicted RBP10.13□□□□□ -0.79
SNCA-211ENST00000508895 TAPT1Q6NXT6 567 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 EEPD1Q7L9B9 569 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 RAB11FIP4Q86YS3 637 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 TCEANC2Q96MN5 208 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 HTATIP2Q9BUP3 242 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 USP26Q9BXU7 913 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 KRT23Q9C075 422 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 KAT14Q9H8E8 782 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 VAT1LQ9HCJ6 419 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 ZHX1Q9UKY1 873 aaPredicted RBP10.13□□□□□ -0.79
SNCA-211ENST00000508895 KIAA1217Q5T5P2 1943 aa10.13□□□□□ -0.79
SNCA-211ENST00000508895 SYNGAP1Q96PV0 1343 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 MYH7BA7E2Y1 1941 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 PALM3A6NDB9 673 aaPredicted RBP10.12□□□□□ -0.79
SNCA-211ENST00000508895 IFIT3O14879 490 aaKnown RBP10.12□□□□□ -0.79
SNCA-211ENST00000508895 FDX1P10109 184 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 TROAPQ12815 778 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 TKFCQ3LXA3 575 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 CCDC144BQ3MJ40 725 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 IFIT1BQ5T764 474 aaKnown RBP10.12□□□□□ -0.79
SNCA-211ENST00000508895 RNF20Q5VTR2 975 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 SH3RF1Q7Z6J0 888 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 ZNF467Q7Z7K2 595 aaPredicted RBP10.12□□□□□ -0.79
SNCA-211ENST00000508895 RALYLQ86SE5 291 aaKnown RBP10.12□□□□□ -0.79
SNCA-211ENST00000508895 IQCA1Q86XH1 822 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 FBXO16Q8IX29 292 aaPredicted RBP10.12□□□□□ -0.79
SNCA-211ENST00000508895 KLHDC9Q8NEP7 349 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 NCOA7Q8NI08 942 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 MTMR8Q96EF0 704 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 LY9Q9HBG7 655 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 XPNPEP3Q9NQH7 507 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 SLC5A4Q9NY91 659 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 FBXO40Q9UH90 709 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 SNX14Q9Y5W7 946 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 DOCK5Q9H7D0 1870 aa10.12□□□□□ -0.79
SNCA-211ENST00000508895 DNM1LO00429 736 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 SOX1O00570 391 aaPredicted RBP10.11□□□□□ -0.79
SNCA-211ENST00000508895 CPA1P15085 419 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 SMPD1P17405 629 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 RXRAP19793 462 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 ITGB8P26012 769 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 CALML3P27482 149 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 RTP1P59025 263 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 RPS6P62753 249 aaKnown RBP10.11□□□□□ -0.79
SNCA-211ENST00000508895 BEX3Q00994 111 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 TRDNQ13061 729 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 GRM4Q14833 912 aa10.11□□□□□ -0.79
SNCA-211ENST00000508895 TSGA10IPQ3SY00 556 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms