RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 NSMFQ6X4W1 530 aa23.17■■□□□ 1.3
SFXN1-209ENST00000508290 ARMCX2Q7L311 632 aa23.17■■□□□ 1.3
SFXN1-209ENST00000508290 TAF6LQ9Y6J9 622 aa23.17■■□□□ 1.3
SFXN1-209ENST00000508290 ZNFX1Q9P2E3 1918 aaKnown RBP23.17■■□□□ 1.3
SFXN1-209ENST00000508290 PALM3A6NDB9 673 aaPredicted RBP23.16■■□□□ 1.3
SFXN1-209ENST00000508290 KLRF2D3W0D1 207 aa23.16■■□□□ 1.3
SFXN1-209ENST00000508290 SNAI1O95863 264 aaPredicted RBP23.16■■□□□ 1.3
SFXN1-209ENST00000508290 ACVR2BQ13705 512 aa23.16■■□□□ 1.3
SFXN1-209ENST00000508290 KRT32Q14532 448 aa23.16■■□□□ 1.3
SFXN1-209ENST00000508290 GRM4Q14833 912 aa23.16■■□□□ 1.3
SFXN1-209ENST00000508290 RNF180Q86T96 592 aa23.16■■□□□ 1.3
SFXN1-209ENST00000508290 IGDCC4Q8TDY8 1250 aa23.16■■□□□ 1.3
SFXN1-209ENST00000508290 FGD4Q96M96 766 aa23.16■■□□□ 1.3
SFXN1-209ENST00000508290 UBA5Q9GZZ9 404 aa23.16■■□□□ 1.3
SFXN1-209ENST00000508290 XPNPEP3Q9NQH7 507 aa23.16■■□□□ 1.3
SFXN1-209ENST00000508290 B4DLN1 442 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 PRC1O43663 620 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 DDAH1O94760 285 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 LIFRP42702 1097 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 MRPL12P52815 198 aaKnown RBP23.15■■□□□ 1.3
SFXN1-209ENST00000508290 CNTN2Q02246 1040 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 TROAPQ12815 778 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 TSGA10IPQ3SY00 556 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 RNF207Q6ZRF8 634 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 MCF2L2Q86YR7 1114 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 CCDC144CPQ8IYA2 1237 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 CLEC4DQ8WXI8 215 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 MAD2L2Q9UI95 211 aa23.15■■□□□ 1.3
SFXN1-209ENST00000508290 SOWAHBA6NEL2 793 aa23.14■■□□□ 1.29
SFXN1-209ENST00000508290 NFIBO00712 420 aa23.14■■□□□ 1.29
SFXN1-209ENST00000508290 EPB41L2O43491 1005 aaKnown RBP23.14■■□□□ 1.29
SFXN1-209ENST00000508290 REC8O95072 547 aa23.14■■□□□ 1.29
SFXN1-209ENST00000508290 KIF5BP33176 963 aa23.14■■□□□ 1.29
SFXN1-209ENST00000508290 ANTXR2P58335 489 aa23.14■■□□□ 1.29
SFXN1-209ENST00000508290 FBXO11Q86XK2 927 aa23.14■■□□□ 1.29
SFXN1-209ENST00000508290 DNERQ8NFT8 737 aa23.14■■□□□ 1.29
SFXN1-209ENST00000508290 AMNQ9BXJ7 453 aa23.14■■□□□ 1.29
SFXN1-209ENST00000508290 JMJD4Q9H9V9 463 aa23.14■■□□□ 1.29
SFXN1-209ENST00000508290 ZHX1Q9UKY1 873 aaPredicted RBP23.14■■□□□ 1.29
SFXN1-209ENST00000508290 MRPL11Q9Y3B7 192 aaKnown RBP23.14■■□□□ 1.29
SFXN1-209ENST00000508290 PTPDC1A2A3K4 754 aa23.13■■□□□ 1.29
SFXN1-209ENST00000508290 DUSP11O75319 330 aaKnown RBP23.13■■□□□ 1.29
SFXN1-209ENST00000508290 HMGB1P09429 215 aaKnown RBP23.13■■□□□ 1.29
SFXN1-209ENST00000508290 CALM1P0DP23 149 aa23.13■■□□□ 1.29
SFXN1-209ENST00000508290 CALM2P0DP24 149 aa23.13■■□□□ 1.29
SFXN1-209ENST00000508290 CALM3P0DP25 149 aa23.13■■□□□ 1.29
SFXN1-209ENST00000508290 BAATQ14032 418 aaPredicted RBP23.13■■□□□ 1.29
SFXN1-209ENST00000508290 CTCFLQ8NI51 663 aaPredicted RBP23.13■■□□□ 1.29
SFXN1-209ENST00000508290 MORC4Q8TE76 937 aa23.13■■□□□ 1.29
SFXN1-209ENST00000508290 LZTS2Q9BRK4 669 aa23.13■■□□□ 1.29
SFXN1-209ENST00000508290 LY9Q9HBG7 655 aa23.13■■□□□ 1.29
SFXN1-209ENST00000508290 SPC25Q9HBM1 224 aa23.13■■□□□ 1.29
SFXN1-209ENST00000508290 FRMPD3Q5JV73 1810 aa23.12■■□□□ 1.29
SFXN1-209ENST00000508290 TAL1P17542 331 aaPredicted RBP23.12■■□□□ 1.29
SFXN1-209ENST00000508290 SMARCA1P28370 1054 aa23.12■■□□□ 1.29
SFXN1-209ENST00000508290 GNAQP50148 359 aa23.12■■□□□ 1.29
SFXN1-209ENST00000508290 QRICH1Q2TAL8 776 aa23.12■■□□□ 1.29
SFXN1-209ENST00000508290 CHST3Q7LGC8 479 aa23.12■■□□□ 1.29
SFXN1-209ENST00000508290 SAMD3Q8N6K7 520 aa23.12■■□□□ 1.29
SFXN1-209ENST00000508290 MTMR8Q96EF0 704 aa23.12■■□□□ 1.29
SFXN1-209ENST00000508290 VTA1Q9NP79 307 aa23.12■■□□□ 1.29
SFXN1-209ENST00000508290 MAP3K20Q9NYL2 800 aaKnown RBP23.12■■□□□ 1.29
SFXN1-209ENST00000508290 CCDC69A6NI79 296 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 H0YGN5 161 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 SH2B2O14492 632 aaPredicted RBP23.11■■□□□ 1.29
SFXN1-209ENST00000508290 ZBTB5O15062 677 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 RPS6P62753 249 aaKnown RBP23.11■■□□□ 1.29
SFXN1-209ENST00000508290 LRRC41Q15345 812 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 USH1GQ495M9 461 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 ZNF654Q8IZM8 581 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 STAG2Q8N3U4 1231 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 NEK1Q96PY6 1258 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 TSEN34Q9BSV6 310 aaKnown RBP23.11■■□□□ 1.29
SFXN1-209ENST00000508290 CPVLQ9H3G5 476 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 RIOX1Q9H6W3 641 aa23.11■■□□□ 1.29
SFXN1-209ENST00000508290 ALDH5A1P51649 535 aaPredicted RBP23.1■■□□□ 1.29
SFXN1-209ENST00000508290 CCDC144BQ3MJ40 725 aa23.1■■□□□ 1.29
SFXN1-209ENST00000508290 GJC2Q5T442 439 aaPredicted RBP23.1■■□□□ 1.29
SFXN1-209ENST00000508290 NFXL1Q6ZNB6 911 aa23.1■■□□□ 1.29
SFXN1-209ENST00000508290 SENP6Q9GZR1 1112 aaPredicted RBP23.1■■□□□ 1.29
SFXN1-209ENST00000508290 KATNBL1Q9H079 304 aa23.1■■□□□ 1.29
SFXN1-209ENST00000508290 CALML3P27482 149 aa23.09■■□□□ 1.29
SFXN1-209ENST00000508290 CST5P28325 142 aaPredicted RBP23.09■■□□□ 1.29
SFXN1-209ENST00000508290 ANO1Q5XXA6 986 aa23.09■■□□□ 1.29
SFXN1-209ENST00000508290 SLC30A10Q6XR72 485 aa23.09■■□□□ 1.29
SFXN1-209ENST00000508290 SGMS1Q86VZ5 419 aa23.09■■□□□ 1.29
SFXN1-209ENST00000508290 VAT1LQ9HCJ6 419 aa23.09■■□□□ 1.29
SFXN1-209ENST00000508290 PHF24Q9UPV7 400 aa23.09■■□□□ 1.29
SFXN1-209ENST00000508290 MOXD2PA6NHM9 499 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 ADAMTS4O75173 837 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 GHRHRQ02643 423 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 C1orf53Q5VUE5 145 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 IQSEC1Q6DN90 963 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 SYNE3Q6ZMZ3 975 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 DHX32Q7L7V1 743 aaKnown RBP23.08■■□□□ 1.29
SFXN1-209ENST00000508290 PCSK9Q8NBP7 692 aaKnown RBP23.08■■□□□ 1.29
SFXN1-209ENST00000508290 NUP133Q8WUM0 1156 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 SPZ1Q9BXG8 430 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 SENP2Q9HC62 589 aa23.08■■□□□ 1.29
SFXN1-209ENST00000508290 Q9Y3F1 56 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms