RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CDK5RAP2Q96SN8 1893 aa8.82□□□□□ -1
VCAN-207ENST00000507162 CACNA1FO60840 1977 aa8.82□□□□□ -1
VCAN-207ENST00000507162 TNKSO95271 1327 aa8.81□□□□□ -1
VCAN-207ENST00000507162 ANKRD11Q6UB99 2663 aaPredicted RBP8.81□□□□□ -1
VCAN-207ENST00000507162 LINC01553A4QN01 128 aa8.81□□□□□ -1
VCAN-207ENST00000507162 IQCF3P0C7M6 154 aa8.81□□□□□ -1
VCAN-207ENST00000507162 PTGS1P23219 599 aa8.81□□□□□ -1
VCAN-207ENST00000507162 SHMT1P34896 483 aa8.81□□□□□ -1
VCAN-207ENST00000507162 RFC2P35250 354 aa8.81□□□□□ -1
VCAN-207ENST00000507162 TFCP2Q12800 502 aa8.81□□□□□ -1
VCAN-207ENST00000507162 NBPF20Q3BBV1 942 aa8.81□□□□□ -1
VCAN-207ENST00000507162 ARMCX2Q7L311 632 aa8.81□□□□□ -1
VCAN-207ENST00000507162 BANK1Q8NDB2 785 aa8.81□□□□□ -1
VCAN-207ENST00000507162 MRPL38Q96DV4 380 aaKnown RBP8.81□□□□□ -1
VCAN-207ENST00000507162 C17orf80Q9BSJ5 609 aa8.81□□□□□ -1
VCAN-207ENST00000507162 FBXO28Q9NVF7 368 aa8.81□□□□□ -1
VCAN-207ENST00000507162 ASTN1O14525 1302 aa8.8□□□□□ -1
VCAN-207ENST00000507162 IL16Q14005 1332 aa8.8□□□□□ -1
VCAN-207ENST00000507162 CFAP47Q6ZTR5 3102 aa8.8□□□□□ -1
VCAN-207ENST00000507162 SIPA1L1O43166 1804 aa8.8□□□□□ -1
VCAN-207ENST00000507162 ZNF292O60281 2723 aa8.8□□□□□ -1
VCAN-207ENST00000507162 VWA5AO00534 786 aa8.8□□□□□ -1
VCAN-207ENST00000507162 BAIAP3O94812 1187 aa8.8□□□□□ -1
VCAN-207ENST00000507162 POLR3DP05423 398 aaPredicted RBP8.8□□□□□ -1
VCAN-207ENST00000507162 CYP7A1P22680 504 aa8.8□□□□□ -1
VCAN-207ENST00000507162 COPB2P35606 906 aa8.8□□□□□ -1
VCAN-207ENST00000507162 PLCD1P51178 756 aa8.8□□□□□ -1
VCAN-207ENST00000507162 WDR5P61964 334 aaKnown RBP8.8□□□□□ -1
VCAN-207ENST00000507162 DEFB103AP81534 67 aa8.8□□□□□ -1
VCAN-207ENST00000507162 SMAD2Q15796 467 aaKnown RBP8.8□□□□□ -1
VCAN-207ENST00000507162 FAM47CQ5HY64 1035 aa8.8□□□□□ -1
VCAN-207ENST00000507162 TLK2Q86UE8 772 aa8.8□□□□□ -1
VCAN-207ENST00000507162 MIGA1Q8NAN2 632 aa8.8□□□□□ -1
VCAN-207ENST00000507162 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.8□□□□□ -1
VCAN-207ENST00000507162 PPP1R13LQ8WUF5 828 aa8.8□□□□□ -1
VCAN-207ENST00000507162 TET1Q8NFU7 2136 aa8.8□□□□□ -1
VCAN-207ENST00000507162 MYO15AQ9UKN7 3530 aa8.79□□□□□ -1
VCAN-207ENST00000507162 DMXL1Q9Y485 3027 aa8.79□□□□□ -1
VCAN-207ENST00000507162 COL4A6Q14031 1691 aa8.79□□□□□ -1
VCAN-207ENST00000507162 MBTPS2O43462 519 aa8.79□□□□□ -1
VCAN-207ENST00000507162 MCAMP43121 646 aa8.79□□□□□ -1
VCAN-207ENST00000507162 NKX3-2P78367 333 aa8.79□□□□□ -1
VCAN-207ENST00000507162 TIGD5Q53EQ6 642 aa8.79□□□□□ -1
VCAN-207ENST00000507162 SNRNP48Q6IEG0 339 aaKnown RBP8.79□□□□□ -1
VCAN-207ENST00000507162 FRMD5Q7Z6J6 570 aa8.79□□□□□ -1
VCAN-207ENST00000507162 ZNF467Q7Z7K2 595 aaPredicted RBP8.79□□□□□ -1
VCAN-207ENST00000507162 RPAINQ86UA6 219 aa8.79□□□□□ -1
VCAN-207ENST00000507162 CLEC10AQ8IUN9 316 aa8.79□□□□□ -1
VCAN-207ENST00000507162 CCDC144CPQ8IYA2 1237 aa8.79□□□□□ -1
VCAN-207ENST00000507162 CPXCR1Q8N123 301 aa8.79□□□□□ -1
VCAN-207ENST00000507162 ANKRD35Q8N283 1001 aa8.79□□□□□ -1
VCAN-207ENST00000507162 NKD2Q969F2 451 aaPredicted RBP8.79□□□□□ -1
VCAN-207ENST00000507162 RMDN1Q96DB5 314 aa8.79□□□□□ -1
VCAN-207ENST00000507162 EHD4Q9H223 541 aa8.79□□□□□ -1
VCAN-207ENST00000507162 IGFLR1Q9H665 355 aa8.79□□□□□ -1
VCAN-207ENST00000507162 VCPKMTQ9H867 229 aa8.79□□□□□ -1
VCAN-207ENST00000507162 ARHGEF10LQ9HCE6 1279 aa8.79□□□□□ -1
VCAN-207ENST00000507162 ADAMTS5Q9UNA0 930 aa8.79□□□□□ -1
VCAN-207ENST00000507162 FARP1Q9Y4F1 1045 aaPredicted RBP8.79□□□□□ -1
VCAN-207ENST00000507162 RIPK3Q9Y572 518 aa8.79□□□□□ -1
VCAN-207ENST00000507162 CTDP1Q9Y5B0 961 aaPredicted RBP8.79□□□□□ -1
VCAN-207ENST00000507162 SCN5AQ14524 2016 aa8.79□□□□□ -1
VCAN-207ENST00000507162 DNAJC25-GNG10A0A024R161 153 aa8.78□□□□□ -1
VCAN-207ENST00000507162 WDR46O15213 610 aaKnown RBP8.78□□□□□ -1
VCAN-207ENST00000507162 GJB5O95377 273 aa8.78□□□□□ -1
VCAN-207ENST00000507162 MYL3P08590 195 aa8.78□□□□□ -1
VCAN-207ENST00000507162 UQCRFS1P1P0C7P4 283 aa8.78□□□□□ -1
VCAN-207ENST00000507162 SMPD1P17405 629 aa8.78□□□□□ -1
VCAN-207ENST00000507162 LTBRP36941 435 aa8.78□□□□□ -1
VCAN-207ENST00000507162 CHMP4BP1P59074 171 aa8.78□□□□□ -1
VCAN-207ENST00000507162 GPM6BQ13491 265 aa8.78□□□□□ -1
VCAN-207ENST00000507162 BFSP2Q13515 415 aa8.78□□□□□ -1
VCAN-207ENST00000507162 SIAH1Q8IUQ4 282 aa8.78□□□□□ -1
VCAN-207ENST00000507162 NSUN3Q9H649 340 aaKnown RBP8.78□□□□□ -1
VCAN-207ENST00000507162 GPHNQ9NQX3 736 aaPredicted RBP8.78□□□□□ -1
VCAN-207ENST00000507162 ZNF214Q9UL59 606 aaPredicted RBP8.78□□□□□ -1
VCAN-207ENST00000507162 PPP1R9AQ9ULJ8 1098 aa8.78□□□□□ -1
VCAN-207ENST00000507162 GNEQ9Y223 722 aaKnown RBP8.78□□□□□ -1
VCAN-207ENST00000507162 NOD1Q9Y239 953 aa8.78□□□□□ -1
VCAN-207ENST00000507162 FASNP49327 2511 aaKnown RBP8.77□□□□□ -1.01
VCAN-207ENST00000507162 E9PSI1 815 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 GALR2O43603 387 aaPredicted RBP8.77□□□□□ -1.01
VCAN-207ENST00000507162 NCK2O43639 380 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 UBTFL1P0CB47 393 aaPredicted RBP8.77□□□□□ -1.01
VCAN-207ENST00000507162 ARID4AP29374 1257 aaPredicted RBP8.77□□□□□ -1.01
VCAN-207ENST00000507162 NBL1P41271 181 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 DLX2Q07687 328 aaPredicted RBP8.77□□□□□ -1.01
VCAN-207ENST00000507162 SIGLEC14Q08ET2 396 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 COL9A2Q14055 689 aaPredicted RBP8.77□□□□□ -1.01
VCAN-207ENST00000507162 EPC2Q52LR7 807 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 EEPD1Q7L9B9 569 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 MAGEB6Q8N7X4 407 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 TEX13BQ9BXU2 312 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 SH2D4AQ9H788 454 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 COPRSQ9NQ92 184 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 PDGFCQ9NRA1 345 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 TMX2Q9Y320 296 aa8.77□□□□□ -1.01
VCAN-207ENST00000507162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.77□□□□□ -1.01
VCAN-207ENST00000507162 DDX49Q9Y6V7 483 aaKnown RBP8.77□□□□□ -1.01
VCAN-207ENST00000507162 CEP250Q9BV73 2442 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms