RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 ZBTB5O15062 677 aa23.08■■□□□ 1.29
DDR1-259ENST00000507046 CPA1P15085 419 aa23.08■■□□□ 1.29
DDR1-259ENST00000507046 GJA8P48165 433 aa23.08■■□□□ 1.29
DDR1-259ENST00000507046 APOA5Q6Q788 366 aa23.08■■□□□ 1.29
DDR1-259ENST00000507046 ZNF467Q7Z7K2 595 aaPredicted RBP23.08■■□□□ 1.29
DDR1-259ENST00000507046 MSL3Q8N5Y2 521 aaKnown RBP23.08■■□□□ 1.29
DDR1-259ENST00000507046 U2AF1L4Q8WU68 220 aaKnown RBP23.08■■□□□ 1.29
DDR1-259ENST00000507046 DEFB118Q96PH6 123 aa23.08■■□□□ 1.29
DDR1-259ENST00000507046 TINF2Q9BSI4 451 aa23.08■■□□□ 1.29
DDR1-259ENST00000507046 RIOX1Q9H6W3 641 aa23.08■■□□□ 1.29
DDR1-259ENST00000507046 NFIBO00712 420 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 IGHA2P01877 340 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 CAPN2P17655 700 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 EN2P19622 333 aaPredicted RBP23.07■■□□□ 1.28
DDR1-259ENST00000507046 RXRAP19793 462 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 TRAF1Q13077 416 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 Q6ZUG5 572 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 HOMER1Q86YM7 354 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 MTMR8Q96EF0 704 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 AMNQ9BXJ7 453 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 CYP39A1Q9NYL5 469 aa23.07■■□□□ 1.28
DDR1-259ENST00000507046 MYH6P13533 1939 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 PTPDC1A2A3K4 754 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 SGPL1O95470 568 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 CYBAP13498 195 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 CCND3P30281 292 aaPredicted RBP23.06■■□□□ 1.28
DDR1-259ENST00000507046 RGS19P49795 217 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 RAB11FIP4Q86YS3 637 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 CCDC144CPQ8IYA2 1237 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 FAM133AQ8N9E0 248 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 CLEC4DQ8WXI8 215 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 SPZ1Q9BXG8 430 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 NRBP1Q9UHY1 535 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 MRPL11Q9Y3B7 192 aaKnown RBP23.06■■□□□ 1.28
DDR1-259ENST00000507046 CYP46A1Q9Y6A2 500 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 SYNGAP1Q96PV0 1343 aa23.06■■□□□ 1.28
DDR1-259ENST00000507046 KLF18A0A0U1RQI7 1052 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 ZBTB43O43298 467 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 SMARCA1P28370 1054 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 CNGA1P29973 690 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 RCAN1P53805 252 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 RNF207Q6ZRF8 634 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 RUFY3Q7L099 469 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 FANCBQ8NB91 859 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 PIGSQ96S52 555 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 TM6SF1Q9BZW5 370 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 ZSWIM6Q9HCJ5 1215 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 RBM28Q9NW13 759 aaKnown RBP23.05■■□□□ 1.28
DDR1-259ENST00000507046 NAP1L2Q9ULW6 460 aaPredicted RBP23.05■■□□□ 1.28
DDR1-259ENST00000507046 CNPY2Q9Y2B0 182 aa23.05■■□□□ 1.28
DDR1-259ENST00000507046 KIAA0100Q14667 2235 aaKnown RBP23.04■■□□□ 1.28
DDR1-259ENST00000507046 CYTH3O43739 400 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 MSCO60682 206 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 ANAPC15P60006 121 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 SLC35G1Q2M3R5 365 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 MAMDC4Q6UXC1 1216 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 MCF2L2Q86YR7 1114 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 BRF1Q92994 677 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 SHISA4Q96DD7 197 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 RRP36Q96EU6 259 aaKnown RBP23.04■■□□□ 1.28
DDR1-259ENST00000507046 MAF1Q9H063 256 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 SEC63Q9UGP8 760 aaKnown RBP23.04■■□□□ 1.28
DDR1-259ENST00000507046 BRPF3Q9ULD4 1205 aa23.04■■□□□ 1.28
DDR1-259ENST00000507046 PNMA6FA0A0J9YX94 578 aa23.03■■□□□ 1.28
DDR1-259ENST00000507046 GOLGA8AA7E2F4 631 aa23.03■■□□□ 1.28
DDR1-259ENST00000507046 GOLGA8BA8MQT2 603 aa23.03■■□□□ 1.28
DDR1-259ENST00000507046 PLEKHA8P1O95397 391 aa23.03■■□□□ 1.28
DDR1-259ENST00000507046 TFRCP02786 760 aaKnown RBP23.03■■□□□ 1.28
DDR1-259ENST00000507046 CNTN2Q02246 1040 aa23.03■■□□□ 1.28
DDR1-259ENST00000507046 BAATQ14032 418 aaPredicted RBP23.03■■□□□ 1.28
DDR1-259ENST00000507046 RTN1Q16799 776 aa23.03■■□□□ 1.28
DDR1-259ENST00000507046 FBXL16Q8N461 479 aa23.03■■□□□ 1.28
DDR1-259ENST00000507046 ADD3Q9UEY8 706 aaKnown RBP23.03■■□□□ 1.28
DDR1-259ENST00000507046 SMCHD1A6NHR9 2005 aa23.03■■□□□ 1.28
DDR1-259ENST00000507046 ASB14A6NK59 587 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 CALML3P27482 149 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 APOBRQ0VD83 1088 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 SLC30A10Q6XR72 485 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 TMTC3Q6ZXV5 915 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 RGS22Q8NE09 1264 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 TRPV1Q8NER1 839 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 PIBF1Q8WXW3 757 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 FGD4Q96M96 766 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 AGXT2Q9BYV1 514 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 CRISPLD2Q9H0B8 497 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 DDX20Q9UHI6 824 aaKnown RBP23.02■■□□□ 1.28
DDR1-259ENST00000507046 PCDHA1Q9Y5I3 950 aa23.02■■□□□ 1.28
DDR1-259ENST00000507046 SOWAHBA6NEL2 793 aa23.01■■□□□ 1.27
DDR1-259ENST00000507046 SEPT4O43236 478 aa23.01■■□□□ 1.27
DDR1-259ENST00000507046 PPP1R11O60927 126 aaPredicted RBP23.01■■□□□ 1.27
DDR1-259ENST00000507046 RPS6P62753 249 aaKnown RBP23.01■■□□□ 1.27
DDR1-259ENST00000507046 MLLT1Q03111 559 aaPredicted RBP23.01■■□□□ 1.27
DDR1-259ENST00000507046 C8orf34Q49A92 452 aa23.01■■□□□ 1.27
DDR1-259ENST00000507046 ARMCX2Q7L311 632 aa23.01■■□□□ 1.27
DDR1-259ENST00000507046 SRBD1Q8N5C6 995 aaKnown RBP23.01■■□□□ 1.27
DDR1-259ENST00000507046 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.01■■□□□ 1.27
DDR1-259ENST00000507046 METAP2P50579 478 aaKnown RBP eCLIP23■■□□□ 1.27
DDR1-259ENST00000507046 PPP2R5BQ15173 497 aa23■■□□□ 1.27
DDR1-259ENST00000507046 PRAMEF19Q5SWL8 479 aa23■■□□□ 1.27
DDR1-259ENST00000507046 MPHOSPH6Q99547 160 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms