RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 GABPAQ06546 454 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 RRP1BQ14684 758 aaKnown RBP6.89□□□□□ -1.31
SCLT1-207ENST00000506233 BRDTQ58F21 947 aaPredicted RBP6.89□□□□□ -1.31
SCLT1-207ENST00000506233 SH3RF1Q7Z6J0 888 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 FMR1NBQ8N0W7 255 aaPredicted RBP6.89□□□□□ -1.31
SCLT1-207ENST00000506233 MAGEB6Q8N7X4 407 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 NGLY1Q96IV0 654 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 USP28Q96RU2 1077 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 MPHOSPH6Q99547 160 aaKnown RBP6.89□□□□□ -1.31
SCLT1-207ENST00000506233 P2RX7Q99572 595 aaKnown RBP6.89□□□□□ -1.31
SCLT1-207ENST00000506233 MTRQ99707 1265 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 CCNL1Q9UK58 526 aaPredicted RBP6.89□□□□□ -1.31
SCLT1-207ENST00000506233 PTPDC1A2A3K4 754 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 CHMP4BP1P59074 171 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 BRICD5Q6PL45 260 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 ENAHQ8N8S7 591 aaPredicted RBP6.89□□□□□ -1.31
SCLT1-207ENST00000506233 UBA5Q9GZZ9 404 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 AKAP2Q9Y2D5 859 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 EFR3BQ9Y2G0 817 aa6.89□□□□□ -1.31
SCLT1-207ENST00000506233 SSBP05455 408 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 PLCD1P51178 756 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 SH3PXD2AQ5TCZ1 1133 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 PTCRAQ6ISU1 281 aaPredicted RBP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 PODNQ7Z5L7 613 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 SMARCC1Q92922 1105 aaPredicted RBP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 LLPHQ9BRT6 129 aaKnown RBP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 PLIN4Q96Q06 1357 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 MBD4O95243 580 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 KIF23Q02241 960 aaPredicted RBP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 STK3Q13188 491 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 NCAPHQ15003 741 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 LONRF3Q496Y0 759 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 CAVIN1Q6NZI2 390 aaKnown RBP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 DHX40Q8IX18 779 aaKnown RBP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 FAM169BQ8N8A8 192 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 MKL1Q969V6 931 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 C8orf48Q96LL4 319 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 CSRNP1Q96S65 589 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 MYL10Q9BUA6 226 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 DCP1AQ9NPI6 582 aaPredicted RBP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 DDX4Q9NQI0 724 aaKnown RBP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 GINM1Q9NU53 330 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 EVA1BQ9NVM1 165 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 PRKAB1Q9Y478 270 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 SYCE3A1L190 88 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 SRGNP10124 158 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 SHC4Q6S5L8 630 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 APTXQ7Z2E3 356 aaKnown RBP6.88□□□□□ -1.31
SCLT1-207ENST00000506233 ZBED2Q9BTP6 218 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 MXD3Q9BW11 206 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 USP3Q9Y6I4 520 aa6.88□□□□□ -1.31
SCLT1-207ENST00000506233 FAM177BA6PVY3 158 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 B4E1Z4 1266 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 OS9Q13438 667 aaPredicted RBP6.87□□□□□ -1.31
SCLT1-207ENST00000506233 BLOC1S2Q6QNY1 142 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 ZBTB33Q86T24 672 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 RAB11FIP4Q86YS3 637 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 SPATA20Q8TB22 786 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 ANKS1AQ92625 1134 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 TFCP2L1Q9NZI6 479 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 MORC2Q9Y6X9 1032 aaPredicted RBP6.87□□□□□ -1.31
SCLT1-207ENST00000506233 NKRFO15226 690 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCLT1-207ENST00000506233 TRIM37O94972 964 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 RXRAP19793 462 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 LIFRP42702 1097 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 GRAPQ13588 217 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 C21orf62-AS1Q17RA5 79 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 PPP4R3BQ5MIZ7 849 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 NAA16Q6N069 864 aaPredicted RBP6.87□□□□□ -1.31
SCLT1-207ENST00000506233 LINC00301Q8NCQ3 95 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 GRAPLQ8TC17 118 aaPredicted RBP6.87□□□□□ -1.31
SCLT1-207ENST00000506233 CNTNAP5Q8WYK1 1306 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 SIP14410 1827 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 ZFYP08048 801 aaPredicted RBP6.87□□□□□ -1.31
SCLT1-207ENST00000506233 JUNDP17535 347 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 CCT2P78371 535 aaKnown RBP6.87□□□□□ -1.31
SCLT1-207ENST00000506233 TXNRD1Q16881 649 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 CCDC152Q4G0S7 254 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 TTC39AQ5SRH9 613 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 ZFPM1Q8IX07 1006 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 CMTR1Q8N1G2 835 aaKnown RBP6.87□□□□□ -1.31
SCLT1-207ENST00000506233 ZSCAN31Q96LW9 406 aaPredicted RBP6.87□□□□□ -1.31
SCLT1-207ENST00000506233 TRIM55Q9BYV6 548 aa6.87□□□□□ -1.31
SCLT1-207ENST00000506233 CCNYL3P0C7X3 344 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 RAB15P59190 212 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 SLC27A3Q5K4L6 730 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 CASC1Q6TDU7 716 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 MIGA1Q8NAN2 632 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 FBXO18Q8NFZ0 1043 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 RUFY2Q8WXA3 655 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 FAM163AQ96GL9 167 aaPredicted RBP6.86□□□□□ -1.31
SCLT1-207ENST00000506233 BRIP1Q9BX63 1249 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 TRPC5Q9UL62 973 aaPredicted RBP6.86□□□□□ -1.31
SCLT1-207ENST00000506233 CHMP3Q9Y3E7 222 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 FAM205AQ6ZU69 1335 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 WDR33Q9C0J8 1336 aaKnown RBP6.86□□□□□ -1.31
SCLT1-207ENST00000506233 EIF4BP23588 611 aaKnown RBP6.86□□□□□ -1.31
SCLT1-207ENST00000506233 NOS2P35228 1153 aa6.86□□□□□ -1.31
SCLT1-207ENST00000506233 RPS8P62241 208 aaKnown RBP6.86□□□□□ -1.31
SCLT1-207ENST00000506233 SBK1Q52WX2 424 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms