RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 MLXIPQ9HAP2 919 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 EHD2Q9NZN4 543 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 PHLPP1O60346 1717 aa13.29□□□□□ -0.28
UBE3D-206ENST00000505226 CYTH3O43739 400 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 CRKLP46109 303 aaKnown RBP13.28□□□□□ -0.28
UBE3D-206ENST00000505226 ZBED6P86452 979 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 TSR1Q2NL82 804 aaKnown RBP13.28□□□□□ -0.28
UBE3D-206ENST00000505226 RASSF8Q8NHQ8 419 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 CAGE1Q8TC20 777 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 CNOT6LQ96LI5 555 aaKnown RBP13.28□□□□□ -0.28
UBE3D-206ENST00000505226 DRC1Q96MC2 740 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 SLAIN2Q9P270 581 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 SHOX2O60902 331 aaPredicted RBP13.28□□□□□ -0.28
UBE3D-206ENST00000505226 PCP11498 1178 aaKnown RBP13.28□□□□□ -0.28
UBE3D-206ENST00000505226 PLCG1P19174 1290 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 CYLC1P35663 651 aaPredicted RBP13.28□□□□□ -0.28
UBE3D-206ENST00000505226 UBA7P41226 1012 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 SLC7A5Q01650 507 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 PSMB7Q99436 277 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 ARHGAP20Q9P2F6 1191 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 MAGEC2Q9UBF1 373 aaPredicted RBP13.28□□□□□ -0.28
UBE3D-206ENST00000505226 SALL4Q9UJQ4 1053 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 JAG2Q9Y219 1238 aa13.28□□□□□ -0.28
UBE3D-206ENST00000505226 MYH10P35580 1976 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 TSPY2A6NKD2 308 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 PRDX5P30044 214 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 CXCR5P32302 372 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 CKAP4Q07065 602 aaKnown RBP13.27□□□□□ -0.28
UBE3D-206ENST00000505226 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 P2RX5Q93086 422 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 RPGRIP1Q96KN7 1286 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 CCSER1Q9C0I3 900 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 RABEP2Q9H5N1 569 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 SNX12Q9UMY4 172 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 MINPP1Q9UNW1 487 aa13.27□□□□□ -0.28
UBE3D-206ENST00000505226 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
UBE3D-206ENST00000505226 USP17L8P0C7I0 530 aa13.27□□□□□ -0.29
UBE3D-206ENST00000505226 VAV2P52735 878 aa13.27□□□□□ -0.29
UBE3D-206ENST00000505226 TXNRD1Q16881 649 aa13.27□□□□□ -0.29
UBE3D-206ENST00000505226 TRIM9Q9C026 710 aa13.27□□□□□ -0.29
UBE3D-206ENST00000505226 CCDC87Q9NVE4 849 aa13.27□□□□□ -0.29
UBE3D-206ENST00000505226 MAD2L2Q9UI95 211 aa13.27□□□□□ -0.29
UBE3D-206ENST00000505226 MOCS3O95396 460 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 MCM3P25205 808 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 CALML3P27482 149 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 ZSCAN29Q8IWY8 852 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 SECISBP2LQ93073 1101 aaKnown RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 DHTKD1Q96HY7 919 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 CRACR2AQ9BSW2 395 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 CPVLQ9H3G5 476 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 SEMA6BQ9H3T3 888 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 MYH14Q7Z406 1995 aaKnown RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 CCDC194A0A1B0GVG4 234 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 NUTM2BA6NNL0 878 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 NUTM2EB1AL46 878 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 CCNE1P24864 410 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 IRAK1P51617 712 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 PDE4DQ08499 809 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 ITPK1Q13572 414 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 CCDC178Q5BJE1 867 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 NFRKBQ6P4R8 1299 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 KIAA0895Q8NCT3 520 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 EHBP1Q8NDI1 1231 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 DYNLL2Q96FJ2 89 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 PCMTD1Q96MG8 357 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 NOC4LQ9BVI4 516 aaKnown RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 MTMR7Q9Y216 660 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 TFAP4Q01664 338 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 KIF5AQ12840 1032 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 UBE4AQ14139 1066 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 ERFEQ4G0M1 354 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 PARP10Q53GL7 1025 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 SND1Q7KZF4 910 aaKnown RBP eCLIP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 GOLGA6L1Q8N7Z2 621 aa13.26□□□□□ -0.29
UBE3D-206ENST00000505226 TSEN2Q8NCE0 465 aaKnown RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 CELF1Q92879 486 aaKnown RBP13.26□□□□□ -0.29
UBE3D-206ENST00000505226 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 GOLGA6BA6NDN3 693 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 NCK2O43639 380 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 ERCC3P19447 782 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 MATR3P43243 847 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBE3D-206ENST00000505226 MTIF2P46199 727 aaKnown RBP13.25□□□□□ -0.29
UBE3D-206ENST00000505226 HSPA2P54652 639 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 CCDC96Q2M329 555 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 TTC19Q6DKK2 380 aaPredicted RBP13.25□□□□□ -0.29
UBE3D-206ENST00000505226 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 MMGT1Q8N4V1 131 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 RETREG2Q8NC44 543 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 PNMA1Q8ND90 353 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 SPATA4Q8NEY3 305 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 ERGIC2Q96RQ1 377 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 NUP58Q9BVL2 599 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 ZNHIT6Q9NWK9 470 aaKnown RBP13.25□□□□□ -0.29
UBE3D-206ENST00000505226 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 FAM184BQ9ULE4 1060 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 PCDHA13Q9Y5I0 950 aa13.25□□□□□ -0.29
UBE3D-206ENST00000505226 SCN7AQ01118 1682 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms