RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 TLK2Q86UE8 772 aa8.36□□□□□ -1.07
RFC1-206ENST00000503784 MSL3Q8N5Y2 521 aaKnown RBP8.36□□□□□ -1.07
RFC1-206ENST00000503784 SLC43A3Q8NBI5 491 aa8.36□□□□□ -1.07
RFC1-206ENST00000503784 MFSD14AQ96MC6 490 aa8.36□□□□□ -1.07
RFC1-206ENST00000503784 MEIS3Q99687 375 aa8.36□□□□□ -1.07
RFC1-206ENST00000503784 FTOQ9C0B1 505 aaKnown RBP eCLIP8.36□□□□□ -1.07
RFC1-206ENST00000503784 VCPKMTQ9H867 229 aa8.36□□□□□ -1.07
RFC1-206ENST00000503784 ARHGEF10LQ9HCE6 1279 aa8.36□□□□□ -1.07
RFC1-206ENST00000503784 TRMT13Q9NUP7 481 aaKnown RBP8.36□□□□□ -1.07
RFC1-206ENST00000503784 ZNF214Q9UL59 606 aaPredicted RBP8.36□□□□□ -1.07
RFC1-206ENST00000503784 ASTN1O14525 1302 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 TRANK1O15050 2925 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 CFAP54Q96N23 3096 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.35□□□□□ -1.07
RFC1-206ENST00000503784 GRXCR2A6NFK2 248 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 WDR46O15213 610 aaKnown RBP8.35□□□□□ -1.07
RFC1-206ENST00000503784 COPB2P35606 906 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 ZAP70P43403 619 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 ZP2Q05996 745 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 FSCN1Q16658 493 aaKnown RBP8.35□□□□□ -1.07
RFC1-206ENST00000503784 MAMDC4Q6UXC1 1216 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 TMEM179Q6ZVK1 233 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 PPP1R13LQ8WUF5 828 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 ZBED2Q9BTP6 218 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 MFRPQ9BY79 579 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 ABHD16BQ9H3Z7 469 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 MUTYHQ9UIF7 546 aa8.35□□□□□ -1.07
RFC1-206ENST00000503784 DNAJC25-GNG10A0A024R161 153 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 RBAK-RBAKDNI3L0D1 243 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 CABYRO75952 493 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 CYP2D6P10635 497 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 AKR1B1P15121 316 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 KCNJ6P48051 423 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 TNFAIP2Q03169 654 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 GABPAQ06546 454 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 FAM83BQ5T0W9 1011 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 CCDC144CPQ8IYA2 1237 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 CPXCR1Q8N123 301 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 MAGEB6Q8N7X4 407 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 REPS2Q8NFH8 660 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 PHOSPHO2Q8TCD6 241 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 FGD4Q96M96 766 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 DBNDD2Q9BQY9 259 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 TEX13BQ9BXU2 312 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 AP5M1Q9H0R1 490 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 ALDH8A1Q9H2A2 487 aaPredicted RBP8.34□□□□□ -1.07
RFC1-206ENST00000503784 SH2D4AQ9H788 454 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 MCM9Q9NXL9 1143 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 PPP1R9AQ9ULJ8 1098 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 TMX2Q9Y320 296 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 RIPK3Q9Y572 518 aa8.34□□□□□ -1.07
RFC1-206ENST00000503784 DDX49Q9Y6V7 483 aaKnown RBP8.34□□□□□ -1.07
RFC1-206ENST00000503784 TNKSO95271 1327 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 DYNC1LI2O43237 492 aaPredicted RBP8.33□□□□□ -1.08
RFC1-206ENST00000503784 ZEB2O60315 1214 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 IRS1P35568 1242 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 TCF15Q12870 199 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 FAM47CQ5HY64 1035 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 CCDC158Q5M9N0 1113 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 FAM117BQ6P1L5 589 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 SIAH1Q8IUQ4 282 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 ANKRD35Q8N283 1001 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 DYNLL2Q96FJ2 89 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 CRBNQ96SW2 442 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 NUP88Q99567 741 aaPredicted RBP8.33□□□□□ -1.08
RFC1-206ENST00000503784 HOMER2Q9NSB8 354 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 SMC4Q9NTJ3 1288 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 ADAMTS5Q9UNA0 930 aa8.33□□□□□ -1.08
RFC1-206ENST00000503784 FOCADQ5VW36 1801 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 DEFB103AP81534 67 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 CNTN2Q02246 1040 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 G3BP1Q13283 466 aaKnown RBP eCLIP8.32□□□□□ -1.08
RFC1-206ENST00000503784 CLUL1Q15846 466 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 PUS10Q3MIT2 529 aaKnown RBP8.32□□□□□ -1.08
RFC1-206ENST00000503784 ADHFE1Q8IWW8 467 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 SUGP1Q8IWZ8 645 aaKnown RBP8.32□□□□□ -1.08
RFC1-206ENST00000503784 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.32□□□□□ -1.08
RFC1-206ENST00000503784 PBXIP1Q96AQ6 731 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 TGS1Q96RS0 853 aaKnown RBP8.32□□□□□ -1.08
RFC1-206ENST00000503784 UPF3BQ9BZI7 483 aaKnown RBP8.32□□□□□ -1.08
RFC1-206ENST00000503784 KATNBL1Q9H079 304 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 RAVER2Q9HCJ3 691 aaKnown RBP8.32□□□□□ -1.08
RFC1-206ENST00000503784 HDAC5Q9UQL6 1122 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 CTDP1Q9Y5B0 961 aaPredicted RBP8.32□□□□□ -1.08
RFC1-206ENST00000503784 CDK5RAP2Q96SN8 1893 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 ZDBF2Q9HCK1 2354 aa8.32□□□□□ -1.08
RFC1-206ENST00000503784 BRWD1Q9NSI6 2320 aa8.31□□□□□ -1.08
RFC1-206ENST00000503784 LINC01553A4QN01 128 aa8.31□□□□□ -1.08
RFC1-206ENST00000503784 SUPT20HL2P0C7V6 817 aa8.31□□□□□ -1.08
RFC1-206ENST00000503784 EEF2P13639 858 aaKnown RBP8.31□□□□□ -1.08
RFC1-206ENST00000503784 SMPD1P17405 629 aa8.31□□□□□ -1.08
RFC1-206ENST00000503784 CHMP4BP1P59074 171 aa8.31□□□□□ -1.08
RFC1-206ENST00000503784 WDR5P61964 334 aaKnown RBP8.31□□□□□ -1.08
RFC1-206ENST00000503784 NKX3-2P78367 333 aa8.31□□□□□ -1.08
RFC1-206ENST00000503784 TNNI3KQ59H18 835 aa8.31□□□□□ -1.08
RFC1-206ENST00000503784 TMEM63BQ5T3F8 832 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms