RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 EIF3BP55884 814 aaKnown RBP5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 TIMM10P62072 90 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 SNRPFP62306 86 aaKnown RBP5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 PTPN12Q05209 780 aaKnown RBP5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 RESTQ13127 1097 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 DNAJC21Q5F1R6 531 aaKnown RBP5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 MAP3K21Q5TCX8 1036 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 CDC37L1Q7L3B6 337 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 PODNQ7Z5L7 613 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 FOXP4Q8IVH2 680 aaPredicted RBP5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 DNAJC10Q8IXB1 793 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 OTUD6BQ8N6M0 293 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 CPLX3Q8WVH0 158 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 HAUS1Q96CS2 278 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 ISCA1Q9BUE6 129 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 TMEM206Q9H813 350 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 FAM114A2Q9NRY5 505 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 STK32BQ9NY57 414 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 CDC23Q9UJX2 597 aa5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 V9GY48 417 aaPredicted RBP5.25□□□□□ -1.57
NDFIP1-202ENST00000503388 CCDC188H7C350 402 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 EVI5O60447 810 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 MMP1P03956 469 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 MCM7P33993 719 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 STAT1P42224 750 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 LMAN1P49257 510 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 USP14P54578 494 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 STRN3Q13033 797 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 SLMAPQ14BN4 828 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 RPS6KA1Q15418 735 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 MAN2A1Q16706 1144 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 SYT10Q6XYQ8 523 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 TRIM42Q8IWZ5 723 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 CCDC82Q8N4S0 544 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 NELFBQ8WX92 580 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 BICD1Q96G01 975 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 CCDC85AQ96PX6 553 aaPredicted RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 CDK5RAP2Q96SN8 1893 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 PRM3Q9NNZ6 103 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 DBNLQ9UJU6 430 aaKnown RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 ATP6V0A2Q9Y487 856 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 JRKLQ9Y4A0 524 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 KDM6AO15550 1401 aaPredicted RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 A0A0D9SFI3 127 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 H0YIN7 160 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 CYP2E1P05181 493 aaPredicted RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 POLR2BP30876 1174 aaKnown RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 ZBED6P86452 979 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 KIF23Q02241 960 aaPredicted RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 CCDC38Q502W7 563 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 ALS2CLQ60I27 953 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 PPP1R21Q6ZMI0 780 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 RNF10Q8N5U6 811 aaKnown RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 SNX29Q8TEQ0 813 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 ARID3AQ99856 593 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 KANSL2Q9H9L4 492 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 KIAA1586Q9HCI6 787 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 HOMER2Q9NSB8 354 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 TMEM51Q9NW97 253 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 TNKSO95271 1327 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 ABCB11O95342 1321 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 A0A1W2PQC6 194 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 BUB1BO60566 1050 aaPredicted RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 UFL1O94874 794 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 CAPN2P17655 700 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 CCNE1P24864 410 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 SARNPP82979 210 aaKnown RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 FKBP3Q00688 224 aaKnown RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 KRT24Q2M2I5 525 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 TSHZ3Q63HK5 1081 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 SRGAP1Q7Z6B7 1085 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.24□□□□□ -1.574e-7■■■■□ 20.4
NDFIP1-202ENST00000503388 DCAF4Q8WV16 495 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 USP28Q96RU2 1077 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 FNBP1Q96RU3 617 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 SMC6Q96SB8 1091 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 ORAI2Q96SN7 254 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 CENPHQ9H3R5 247 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 CNOT10Q9H9A5 744 aaKnown RBP5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 PPCSQ9HAB8 311 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 SPTLC3Q9NUV7 552 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 PCDHA7Q9UN72 937 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 SAMM50Q9Y512 469 aa5.24□□□□□ -1.57
NDFIP1-202ENST00000503388 LRRC37A2A6NM11 1700 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 A0A1W2PRG0 241 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 XPOTO43592 962 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 XRCC5P13010 732 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 MUTP22033 750 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 SLC1A4P43007 532 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 SSR1P43307 286 aaKnown RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 LACTBP83111 547 aaPredicted RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 MORC3Q14149 939 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 KCNB1Q14721 858 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 NKX1-1Q15270 411 aaPredicted RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PDZD4Q76G19 769 aaPredicted RBP5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 NLRP10Q86W26 655 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 PNMA1Q8ND90 353 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 AMNQ9BXJ7 453 aa5.23□□□□□ -1.57
NDFIP1-202ENST00000503388 COA1Q9GZY4 146 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms