RNA–Protein interactions for RNA: ENST00000502066.6

CRNDE-202, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-202ENST00000502066 ETFBKMTQ8IXQ9 262 aa9.14□□□□□ -0.95
CRNDE-202ENST00000502066 PRRX2Q99811 253 aa9.14□□□□□ -0.95
CRNDE-202ENST00000502066 SAP130Q9H0E3 1048 aa9.14□□□□□ -0.95
CRNDE-202ENST00000502066 SRA1Q9HD15 236 aaKnown RBP9.14□□□□□ -0.95
CRNDE-202ENST00000502066 DMXL1Q9Y485 3027 aa9.13□□□□□ -0.95
CRNDE-202ENST00000502066 CENPJQ9HC77 1338 aaPredicted RBP9.13□□□□□ -0.95
CRNDE-202ENST00000502066 DHX15O43143 795 aaKnown RBP9.13□□□□□ -0.95
CRNDE-202ENST00000502066 DCXO43602 365 aa9.13□□□□□ -0.95
CRNDE-202ENST00000502066 RRS1Q15050 365 aaKnown RBP9.13□□□□□ -0.95
CRNDE-202ENST00000502066 MAP4K3Q8IVH8 894 aa9.13□□□□□ -0.95
CRNDE-202ENST00000502066 FAM43AQ8N2R8 423 aa9.13□□□□□ -0.95
CRNDE-202ENST00000502066 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
CRNDE-202ENST00000502066 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.13□□□□□ -0.95
CRNDE-202ENST00000502066 COL1A1P02452 1464 aaPredicted RBP9.13□□□□□ -0.95
CRNDE-202ENST00000502066 MYO15AQ9UKN7 3530 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 CD68P34810 354 aaPredicted RBP9.12□□□□□ -0.95
CRNDE-202ENST00000502066 SOX18P35713 384 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 TXKP42681 527 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 HSP90AB2PQ58FF8 381 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 CEP135Q66GS9 1140 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 ZDHHC13Q8IUH4 622 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 TRIM42Q8IWZ5 723 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 BRI3BPQ8WY22 251 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 RNPC3Q96LT9 517 aaKnown RBP9.12□□□□□ -0.95
CRNDE-202ENST00000502066 HNRNPABQ99729 332 aaKnown RBP9.12□□□□□ -0.95
CRNDE-202ENST00000502066 RTFDC1Q9BY42 306 aaPredicted RBP9.12□□□□□ -0.95
CRNDE-202ENST00000502066 TMX4Q9H1E5 349 aaPredicted RBP9.12□□□□□ -0.95
CRNDE-202ENST00000502066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.12□□□□□ -0.95
CRNDE-202ENST00000502066 KCNQ5Q9NR82 932 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 PRKAG2Q9UGJ0 569 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 GABRQQ9UN88 632 aa9.12□□□□□ -0.95
CRNDE-202ENST00000502066 HMX2A2RU54 273 aa9.11□□□□□ -0.95
CRNDE-202ENST00000502066 KIAA1324LA8MWY0 1029 aaPredicted RBP9.11□□□□□ -0.95
CRNDE-202ENST00000502066 PROB1E7EW31 1015 aa9.11□□□□□ -0.95
CRNDE-202ENST00000502066 DDX3YO15523 660 aaKnown RBP9.11□□□□□ -0.95
CRNDE-202ENST00000502066 HOXD8P13378 290 aaPredicted RBP9.11□□□□□ -0.95
CRNDE-202ENST00000502066 ADSSL1Q8N142 457 aa9.11□□□□□ -0.95
CRNDE-202ENST00000502066 HERVK_113Q902F9 699 aa9.11□□□□□ -0.95
CRNDE-202ENST00000502066 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
CRNDE-202ENST00000502066 FMNL2Q96PY5 1086 aa9.11□□□□□ -0.95
CRNDE-202ENST00000502066 C7orf69Q9H7B7 122 aa9.11□□□□□ -0.95
CRNDE-202ENST00000502066 RTL1A6NKG5 1358 aa9.11□□□□□ -0.95
CRNDE-202ENST00000502066 PLXNA1Q9UIW2 1896 aa9.11□□□□□ -0.95
CRNDE-202ENST00000502066 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.1□□□□□ -0.95
CRNDE-202ENST00000502066 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.1□□□□□ -0.95
CRNDE-202ENST00000502066 GSC2O15499 205 aa9.1□□□□□ -0.95
CRNDE-202ENST00000502066 WDHD1O75717 1129 aaPredicted RBP9.1□□□□□ -0.95
CRNDE-202ENST00000502066 NFIAQ12857 509 aa9.1□□□□□ -0.95
CRNDE-202ENST00000502066 DPP8Q6V1X1 898 aaPredicted RBP9.1□□□□□ -0.95
CRNDE-202ENST00000502066 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
CRNDE-202ENST00000502066 COG5Q9UP83 839 aa9.1□□□□□ -0.95
CRNDE-202ENST00000502066 ZFYVE26Q68DK2 2539 aa9.1□□□□□ -0.95
CRNDE-202ENST00000502066 A0A0G2JMZ2 1700 aa9.1□□□□□ -0.95
CRNDE-202ENST00000502066 DNAH12Q6ZR08 3092 aa9.1□□□□□ -0.95
CRNDE-202ENST00000502066 GVINP1Q7Z2Y8 2422 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 CCL15-CCL14A0A0B4J2E2 113 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 PRMT3O60678 531 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 PUM1Q14671 1186 aaKnown RBP eCLIP9.09□□□□□ -0.95
CRNDE-202ENST00000502066 CCL15Q16663 113 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 CRY2Q49AN0 593 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 KIAA1211Q6ZU35 1233 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 BADQ92934 168 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 MUC3BQ9H195 1237 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 RASSF4Q9H2L5 321 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 DBNDD1Q9H9R9 158 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 CPA4Q9UI42 421 aa9.09□□□□□ -0.95
CRNDE-202ENST00000502066 EVC2Q86UK5 1308 aa9.08□□□□□ -0.96
CRNDE-202ENST00000502066 A6NJR5 290 aa9.08□□□□□ -0.96
CRNDE-202ENST00000502066 TM4SF5O14894 197 aa9.08□□□□□ -0.96
CRNDE-202ENST00000502066 RFX1P22670 979 aa9.08□□□□□ -0.96
CRNDE-202ENST00000502066 CDC27P30260 824 aa9.08□□□□□ -0.96
CRNDE-202ENST00000502066 CAPN12Q6ZSI9 719 aa9.08□□□□□ -0.96
CRNDE-202ENST00000502066 OR13H1Q8NG92 308 aa9.08□□□□□ -0.96
CRNDE-202ENST00000502066 RNF114Q9Y508 228 aa9.08□□□□□ -0.96
CRNDE-202ENST00000502066 CACNA1HO95180 2353 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 H0Y858 1186 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 HSP90AB1P08238 724 aaKnown RBP9.07□□□□□ -0.96
CRNDE-202ENST00000502066 COL6A1P12109 1028 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 HOXA10P31260 410 aaPredicted RBP9.07□□□□□ -0.96
CRNDE-202ENST00000502066 ZNF280AP59817 542 aaPredicted RBP9.07□□□□□ -0.96
CRNDE-202ENST00000502066 HYAL2Q12891 473 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 DUOXA2Q1HG44 320 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 C17orf99Q6UX52 265 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 FAM178BQ8IXR5 827 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 UBASH3BQ8TF42 649 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 CEP41Q9BYV8 373 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 IRF2BPLQ9H1B7 796 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 TLR9Q9NR96 1032 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 ATP6V0A2Q9Y487 856 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 RTL9Q8NET4 1388 aa9.07□□□□□ -0.96
CRNDE-202ENST00000502066 CHD9Q3L8U1 2897 aa9.06□□□□□ -0.96
CRNDE-202ENST00000502066 PRR19A6NJB7 356 aa9.06□□□□□ -0.96
CRNDE-202ENST00000502066 FSCN2O14926 492 aa9.06□□□□□ -0.96
CRNDE-202ENST00000502066 BRD2P25440 801 aaKnown RBP9.06□□□□□ -0.96
CRNDE-202ENST00000502066 SCNN1AP37088 669 aa9.06□□□□□ -0.96
CRNDE-202ENST00000502066 NBPF9Q3BBW0 867 aa9.06□□□□□ -0.96
CRNDE-202ENST00000502066 FAM46AQ96IP4 442 aaKnown RBP9.06□□□□□ -0.96
CRNDE-202ENST00000502066 COG3Q96JB2 828 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms