RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 PRR12Q9ULL5 1215 aa9.48□□□□□ -0.89
SMARCD3-215ENST00000496530 DIS3Q9Y2L1 958 aaKnown RBP9.48□□□□□ -0.89
SMARCD3-215ENST00000496530 MSCO60682 206 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 TFRCP02786 760 aaKnown RBP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 GJB1P08034 283 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 GOLGA8HP0CJ92 632 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 CALM1P0DP23 149 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 CALM2P0DP24 149 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 CALM3P0DP25 149 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 SNHG28P0DPA3 235 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 ALAS1P13196 640 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 ADD1P35611 737 aaKnown RBP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 RGS19P49795 217 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 METAP2P50579 478 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 AKAP17AQ02040 695 aaKnown RBP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 MTFR1Q15390 333 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 ME3Q16798 604 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 OLFML2BQ68BL8 750 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 CPLX2Q6PUV4 134 aaKnown RBP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 MICU3Q86XE3 530 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 ZNF654Q8IZM8 581 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 FANCBQ8NB91 859 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 IL27Q8NEV9 243 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 REPS2Q8NFH8 660 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 CTCFLQ8NI51 663 aaPredicted RBP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 USP6NLQ92738 828 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 SNX21Q969T3 373 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 TMX3Q96JJ7 454 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 TRERF1Q96PN7 1200 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 UBA5Q9GZZ9 404 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 RANBP17Q9H2T7 1088 aaKnown RBP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 NCOA5Q9HCD5 579 aaKnown RBP9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 PFASO15067 1338 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 WDR19Q8NEZ3 1342 aa9.47□□□□□ -0.89
SMARCD3-215ENST00000496530 K7ELQ4 463 aaPredicted RBP9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 SGPL1O95470 568 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 ICAM1P05362 532 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 PRKAR2AP13861 404 aaKnown RBP9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 CNGA1P29973 690 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 KIF5BP33176 963 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 SLC16A2P36021 539 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 GJA8P48165 433 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 RTN1Q16799 776 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 TTBK2Q6IQ55 1244 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 CMTR1Q8N1G2 835 aaKnown RBP9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 MSL3Q8N5Y2 521 aaKnown RBP9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 U2AF1L4Q8WU68 220 aaKnown RBP9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 IL17RAQ96F46 866 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 UNC93B1Q9H1C4 597 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 HOMER2Q9NSB8 354 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 RNF146Q9NTX7 359 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 CNPY2Q9Y2B0 182 aa9.46□□□□□ -0.9
SMARCD3-215ENST00000496530 DOCK3Q8IZD9 2030 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 CCDC196A0A1B0GTZ2 297 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 POTEFA5A3E0 1075 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 B4DLN1 442 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 KLRF2D3W0D1 207 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 POTEB2H3BUK9 544 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 PFKFB2O60825 505 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 DDAH1O94760 285 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 EN2P19622 333 aaPredicted RBP9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 GNAQP50148 359 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 MRPL12P52815 198 aaKnown RBP9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 FOSBP53539 338 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 CACNB2Q08289 660 aaPredicted RBP9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 SSRP1Q08945 709 aaKnown RBP9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 CCL14Q16627 93 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 APOA5Q6Q788 366 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 NPLOC4Q8TAT6 608 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 MAML3Q96JK9 1138 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 AGBL1Q96MI9 1066 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 DEFB118Q96PH6 123 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 PAK6Q9NQU5 681 aaPredicted RBP9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 ADD3Q9UEY8 706 aaKnown RBP9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 NRBP1Q9UHY1 535 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 SMC3Q9UQE7 1217 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 PLXNA1Q9UIW2 1896 aa9.45□□□□□ -0.9
SMARCD3-215ENST00000496530 hCG_1642624A0A1W2PR95 340 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 PTPDC1A2A3K4 754 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 ASB14A6NK59 587 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 COBLO75128 1261 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 LARGE1O95461 756 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 PGK2P07205 417 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 SNAP25P60880 206 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 SCRN1Q12765 414 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 CDC37Q16543 378 aaPredicted RBP9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 NSMFQ6X4W1 530 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 RASGRP2Q7LDG7 609 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 ZNF467Q7Z7K2 595 aaPredicted RBP9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 SGMS1Q86VZ5 419 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 MCF2L2Q86YR7 1114 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 ADGRF4Q8IZF3 695 aa9.44□□□□□ -0.9
SMARCD3-215ENST00000496530 STAG2Q8N3U4 1231 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms