RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	GPHN	Q9NQX3	736 aa	Predicted RBP	18.54	■□□□□ 0.56
PRKCZ-222	ENST00000496325	IGHA2	P01877	340 aa		18.53	■□□□□ 0.56
PRKCZ-222	ENST00000496325	COPB2	P35606	906 aa		18.53	■□□□□ 0.56
PRKCZ-222	ENST00000496325	TRMT44	Q8IYL2	757 aa	Known RBP	18.53	■□□□□ 0.56
PRKCZ-222	ENST00000496325	TTYH1	Q9H313	450 aa	Predicted RBP	18.53	■□□□□ 0.56
PRKCZ-222	ENST00000496325	HOMER2	Q9NSB8	354 aa		18.53	■□□□□ 0.56
PRKCZ-222	ENST00000496325	ALAS1	P13196	640 aa		18.52	■□□□□ 0.56
PRKCZ-222	ENST00000496325	KCTD2	Q14681	263 aa		18.52	■□□□□ 0.56
PRKCZ-222	ENST00000496325	WTAP	Q15007	396 aa		18.52	■□□□□ 0.56
PRKCZ-222	ENST00000496325	SHH	Q15465	462 aa		18.52	■□□□□ 0.56
PRKCZ-222	ENST00000496325	C9orf50	Q5SZB4	431 aa		18.52	■□□□□ 0.56
PRKCZ-222	ENST00000496325	GPATCH4	Q5T3I0	446 aa	Known RBP	18.52	■□□□□ 0.56
PRKCZ-222	ENST00000496325	STAG2	Q8N3U4	1231 aa		18.52	■□□□□ 0.56
PRKCZ-222	ENST00000496325	ERICH2	A1L162	156 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	PRC1	O43663	620 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	PARP1	P09874	1014 aa	Known RBP	18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	CYP2C19	P33261	490 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	ATN1	P54259	1190 aa	Predicted RBP	18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	ZNF792	Q3KQV3	632 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	MUM1L1	Q5H9M0	696 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	TMEM67	Q5HYA8	995 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	RNF20	Q5VTR2	975 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	CHST13	Q8NET6	341 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	MAML3	Q96JK9	1138 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	LBHD1	Q9BQE6	289 aa	Predicted RBP	18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	SENP6	Q9GZR1	1112 aa	Predicted RBP	18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	RNF146	Q9NTX7	359 aa		18.51	■□□□□ 0.55
PRKCZ-222	ENST00000496325	DNAJC25-GNG10	A0A024R161	153 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	ICAM1	P05362	532 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	MCM5	P33992	734 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	ADCK5	Q3MIX3	580 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	ASPRV1	Q53RT3	343 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	MFSD14C	Q5VZR4	134 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	TRERF1	Q96PN7	1200 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	LRRC2	Q9BYS8	371 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	LY9	Q9HBG7	655 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	CCPG1	Q9ULG6	757 aa		18.5	■□□□□ 0.55
PRKCZ-222	ENST00000496325	SART3	Q15020	963 aa	Known RBP	18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	TKFC	Q3LXA3	575 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	TSGA10IP	Q3SY00	556 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	OLFML2B	Q68BL8	750 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	ADGRF4	Q8IZF3	695 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	ANKRD35	Q8N283	1001 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	TRPV1	Q8NER1	839 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	DDX11	Q96FC9	970 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	ACAD9	Q9H845	621 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	SLC5A4	Q9NY91	659 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	FBXO40	Q9UH90	709 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	MAD2L2	Q9UI95	211 aa		18.49	■□□□□ 0.55
PRKCZ-222	ENST00000496325	PALM3	A6NDB9	673 aa	Predicted RBP	18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	SH2B2	O14492	632 aa	Predicted RBP	18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	TROAP	Q12815	778 aa		18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	GRM4	Q14833	912 aa		18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	PRAMEF19	Q5SWL8	479 aa		18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	KCNB2	Q92953	911 aa		18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	FGD4	Q96M96	766 aa		18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	NEK1	Q96PY6	1258 aa		18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	VAT1L	Q9HCJ6	419 aa		18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	A1CF	Q9NQ94	594 aa	Known RBP	18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	DIS3	Q9Y2L1	958 aa	Known RBP	18.48	■□□□□ 0.55
PRKCZ-222	ENST00000496325	HSPA4	P34932	840 aa		18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	CDC37	Q16543	378 aa	Predicted RBP	18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	SLC35G1	Q2M3R5	365 aa		18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	USP38	Q8NB14	1042 aa		18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	TMEM87B	Q96K49	555 aa		18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	TCEANC2	Q96MN5	208 aa		18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	MTA3	Q9BTC8	594 aa		18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	MYL10	Q9BUA6	226 aa		18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	JMJD4	Q9H9V9	463 aa		18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	SNX14	Q9Y5W7	946 aa		18.47	■□□□□ 0.55
PRKCZ-222	ENST00000496325	KLRF2	D3W0D1	207 aa		18.46	■□□□□ 0.55
PRKCZ-222	ENST00000496325	REC8	O95072	547 aa		18.46	■□□□□ 0.55
PRKCZ-222	ENST00000496325	CYBA	P13498	195 aa		18.46	■□□□□ 0.55
PRKCZ-222	ENST00000496325	RTP1	P59025	263 aa		18.46	■□□□□ 0.55
PRKCZ-222	ENST00000496325	EXOSC10	Q01780	885 aa	Known RBP	18.46	■□□□□ 0.55
PRKCZ-222	ENST00000496325	CNTN2	Q02246	1040 aa		18.46	■□□□□ 0.55
PRKCZ-222	ENST00000496325	ZNF654	Q8IZM8	581 aa		18.46	■□□□□ 0.55
PRKCZ-222	ENST00000496325	TINF2	Q9BSI4	451 aa		18.46	■□□□□ 0.55
PRKCZ-222	ENST00000496325	LRRC37A2	A6NM11	1700 aa		18.46	■□□□□ 0.55
PRKCZ-222	ENST00000496325	NFIB	O00712	420 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	DHX16	O60231	1041 aa	Known RBP	18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	CPA1	P15085	419 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	FOSL2	P15408	326 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	CNGA1	P29973	690 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	QRICH1	Q2TAL8	776 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	USH1G	Q495M9	461 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	CATIP	Q7Z7H3	387 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	FAM133A	Q8N9E0	248 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	NUP133	Q8WUM0	1156 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	CLEC4D	Q8WXI8	215 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	PURB	Q96QR8	312 aa	Known RBP	18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	USP26	Q9BXU7	913 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	WDR19	Q8NEZ3	1342 aa		18.45	■□□□□ 0.54
PRKCZ-222	ENST00000496325	SOWAHB	A6NEL2	793 aa		18.44	■□□□□ 0.54
PRKCZ-222	ENST00000496325	LIFR	P42702	1097 aa		18.44	■□□□□ 0.54
PRKCZ-222	ENST00000496325	NSMF	Q6X4W1	530 aa		18.44	■□□□□ 0.54
PRKCZ-222	ENST00000496325	NFXL1	Q6ZNB6	911 aa		18.44	■□□□□ 0.54
PRKCZ-222	ENST00000496325	DHX32	Q7L7V1	743 aa	Known RBP	18.44	■□□□□ 0.54
PRKCZ-222	ENST00000496325	RAB11FIP4	Q86YS3	637 aa		18.44	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms