RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 FAM177A1Q8N128 213 aaPredicted RBP25.08■■□□□ 1.61
ECHDC3-205ENST00000496136 CCDC148Q8NFR7 591 aa25.08■■□□□ 1.61
ECHDC3-205ENST00000496136 CCDC12Q8WUD4 166 aaPredicted RBP25.08■■□□□ 1.61
ECHDC3-205ENST00000496136 SMCO2A6NFE2 343 aa25.08■■□□□ 1.6
ECHDC3-205ENST00000496136 ALAS1P13196 640 aa25.08■■□□□ 1.6
ECHDC3-205ENST00000496136 PDIA4P13667 645 aaKnown RBP25.08■■□□□ 1.6
ECHDC3-205ENST00000496136 SPATC1LQ9H0A9 340 aa25.08■■□□□ 1.6
ECHDC3-205ENST00000496136 ABCB11O95342 1321 aa25.07■■□□□ 1.6
ECHDC3-205ENST00000496136 MMP1P03956 469 aa25.07■■□□□ 1.6
ECHDC3-205ENST00000496136 NPY5RQ15761 445 aa25.07■■□□□ 1.6
ECHDC3-205ENST00000496136 PPP1R18Q6NYC8 613 aa25.07■■□□□ 1.6
ECHDC3-205ENST00000496136 ANKRD13CQ8N6S4 541 aa25.07■■□□□ 1.6
ECHDC3-205ENST00000496136 MTMR6Q9Y217 621 aa25.07■■□□□ 1.6
ECHDC3-205ENST00000496136 MRPL11Q9Y3B7 192 aaKnown RBP25.07■■□□□ 1.6
ECHDC3-205ENST00000496136 ESYT2A0FGR8 921 aa25.06■■□□□ 1.6
ECHDC3-205ENST00000496136 OPLAHO14841 1288 aa25.06■■□□□ 1.6
ECHDC3-205ENST00000496136 ALDH1A1P00352 501 aa25.06■■□□□ 1.6
ECHDC3-205ENST00000496136 VPS37CA5D8V6 355 aaPredicted RBP25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 ERVK-9P63128 1117 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 ERVK-24P63145 666 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 RIOX2Q8IUF8 465 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 GPRC5AQ8NFJ5 357 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 TRERF1Q96PN7 1200 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 PSTPIP2Q9H939 334 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 ZFYVE28Q9HCC9 887 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 HOMER2Q9NSB8 354 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 ADGRA2Q96PE1 1338 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 CA12O43570 354 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 TLR2O60603 784 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 CALML3P27482 149 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 GNA11P29992 359 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 CLEC4DQ8WXI8 215 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 MOV10L1Q9BXT6 1211 aaKnown RBP25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 C6orf50Q9HD87 102 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 MORF4L1Q9UBU8 362 aa25.05■■□□□ 1.6
ECHDC3-205ENST00000496136 ADAMTS3O15072 1205 aa25.04■■□□□ 1.6
ECHDC3-205ENST00000496136 CRHR2Q13324 411 aa25.04■■□□□ 1.6
ECHDC3-205ENST00000496136 MUM1L1Q5H9M0 696 aa25.04■■□□□ 1.6
ECHDC3-205ENST00000496136 GALNT17Q6IS24 598 aa25.04■■□□□ 1.6
ECHDC3-205ENST00000496136 RIC8AQ9NPQ8 531 aa25.04■■□□□ 1.6
ECHDC3-205ENST00000496136 CIZ1Q9ULV3 898 aaPredicted RBP25.04■■□□□ 1.6
ECHDC3-205ENST00000496136 PCDHA4Q9UN74 947 aa25.04■■□□□ 1.6
ECHDC3-205ENST00000496136 ZDHHC9Q9Y397 364 aa25.04■■□□□ 1.6
ECHDC3-205ENST00000496136 TKFCQ3LXA3 575 aa25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 OXER1Q8TDS5 423 aa25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 TBC1D5Q92609 795 aa25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 RNF146Q9NTX7 359 aa25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 CPA4Q9UI42 421 aa25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 BTBD18B2RXH4 712 aa25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 ADCY7P51828 1080 aa25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 MRPL12P52815 198 aaKnown RBP25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 SAFBQ15424 915 aaKnown RBP eCLIP25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 C17orf99Q6UX52 265 aa25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 DIS3L2Q8IYB7 885 aaKnown RBP25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 BLIDQ8IZY5 108 aa25.03■■□□□ 1.6
ECHDC3-205ENST00000496136 NFIBO00712 420 aa25.02■■□□□ 1.6
ECHDC3-205ENST00000496136 BRD1O95696 1058 aa25.02■■□□□ 1.6
ECHDC3-205ENST00000496136 NUCB2P80303 420 aa25.02■■□□□ 1.6
ECHDC3-205ENST00000496136 FAM110CQ1W6H9 321 aa25.02■■□□□ 1.6
ECHDC3-205ENST00000496136 MCTP1Q6DN14 999 aa25.02■■□□□ 1.6
ECHDC3-205ENST00000496136 DAGLBQ8NCG7 672 aa25.02■■□□□ 1.6
ECHDC3-205ENST00000496136 CUL5Q93034 780 aa25.02■■□□□ 1.6
ECHDC3-205ENST00000496136 R3HDMLQ9H3Y0 253 aa25.02■■□□□ 1.6
ECHDC3-205ENST00000496136 PCNTO95613 3336 aa25.02■■□□□ 1.6
ECHDC3-205ENST00000496136 MEIS2O14770 477 aa25.01■■□□□ 1.59
ECHDC3-205ENST00000496136 SLC25A27O95847 323 aa25.01■■□□□ 1.59
ECHDC3-205ENST00000496136 ZSCAN22P10073 491 aaPredicted RBP25.01■■□□□ 1.59
ECHDC3-205ENST00000496136 BCRP11274 1271 aa25.01■■□□□ 1.59
ECHDC3-205ENST00000496136 ERCC3P19447 782 aa25.01■■□□□ 1.59
ECHDC3-205ENST00000496136 NCAPG2Q86XI2 1143 aa25.01■■□□□ 1.59
ECHDC3-205ENST00000496136 CHST13Q8NET6 341 aa25.01■■□□□ 1.59
ECHDC3-205ENST00000496136 GLT8D2Q9H1C3 349 aa25.01■■□□□ 1.59
ECHDC3-205ENST00000496136 CHMP5Q9NZZ3 219 aa25.01■■□□□ 1.59
ECHDC3-205ENST00000496136 M0R2N6 131 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 KRT2P35908 639 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 NR5A1Q13285 461 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 FOXD4L5Q5VV16 416 aaPredicted RBP25■■□□□ 1.59
ECHDC3-205ENST00000496136 USP17L6PQ6QN14 398 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 BICD2Q8TD16 824 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 FOXD4L4Q8WXT5 416 aaPredicted RBP25■■□□□ 1.59
ECHDC3-205ENST00000496136 CFBP00751 764 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 U2AF2P26368 475 aaKnown RBP eCLIP25■■□□□ 1.59
ECHDC3-205ENST00000496136 CCNA1P78396 465 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 FERMT3Q86UX7 667 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 MCF2L2Q86YR7 1114 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 PORCNQ9H237 461 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 FOXP1Q9H334 677 aaPredicted RBP25■■□□□ 1.59
ECHDC3-205ENST00000496136 ACAD9Q9H845 621 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 BRMS1Q9HCU9 246 aa25■■□□□ 1.59
ECHDC3-205ENST00000496136 BIN2Q9UBW5 565 aaPredicted RBP25■■□□□ 1.59
ECHDC3-205ENST00000496136 KIF28PB7ZC32 967 aa24.99■■□□□ 1.59
ECHDC3-205ENST00000496136 RNF186Q9NXI6 227 aa24.99■■□□□ 1.59
ECHDC3-205ENST00000496136 FBXO40Q9UH90 709 aa24.99■■□□□ 1.59
ECHDC3-205ENST00000496136 PCDHA6Q9UN73 950 aa24.99■■□□□ 1.59
ECHDC3-205ENST00000496136 PCDHA8Q9Y5H6 950 aa24.99■■□□□ 1.59
ECHDC3-205ENST00000496136 PIK3CDO00329 1044 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 HOXA13P31271 388 aaPredicted RBP24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 COPB2P35606 906 aa24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 CLK2P49760 499 aaKnown RBP24.98■■□□□ 1.59
ECHDC3-205ENST00000496136 GHRHRQ02643 423 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms