RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 OTUB1Q96FW1 271 aaPredicted RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 USP26Q9BXU7 913 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 ASPSCR1Q9BZE9 553 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 FHDC1Q9C0D6 1143 aaPredicted RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 RNPEPQ9H4A4 650 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 PASKQ96RG2 1323 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 ANKRD30BQ9BXX2 1392 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 NLRP6P59044 892 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 AP2B1P63010 937 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 LRMPQ12912 555 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 BEND3Q5T5X7 828 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 TMC5Q6UXY8 1006 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 ZGPATQ8N5A5 531 aaKnown RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 ZBED2Q9BTP6 218 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 VPS16Q9H269 839 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 SNX25Q9H3E2 840 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 SUN2Q9UH99 717 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 GPRASP1Q5JY77 1395 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 RTL9Q8NET4 1388 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 UBXN8O00124 270 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 IFNB1P01574 187 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 P4HA1P13674 534 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 ALS2CLQ60I27 953 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 C16orf62Q7Z3J2 963 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 OSBPL1AQ9BXW6 950 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 ANKRD2Q9GZV1 360 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 ATP8A1Q9Y2Q0 1164 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 RNF103-CHMP3A0A140T963 221 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 F8W8V4 182 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 GOLGA8MH3BSY2 632 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 ZSCAN9O15535 394 aaPredicted RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 SMARCA5O60264 1052 aaPredicted RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 DCTN3O75935 186 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 HEXIM1O94992 359 aaKnown RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 DMPKQ09013 629 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 KLHL24Q6TFL4 600 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 CCDC103Q8IW40 242 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 CATSPER1Q8NEC5 780 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 ARHGEF1Q92888 912 aaKnown RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 LRRC59Q96AG4 307 aaKnown RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 CLEC4MQ9H2X3 399 aaPredicted RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 TUFT1Q9NNX1 390 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 STAM2O75886 525 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 POLR2BP30876 1174 aaKnown RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 EIF2S3P41091 472 aaKnown RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 AARSP49588 968 aaKnown RBP eCLIP5.62□□□□□ -1.519e-8■■■■■ 61.8
NF1-216ENST00000495910 MTHFSP49914 203 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 SLC30A9Q6PML9 568 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 RGS9BPQ6ZS82 235 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 CAPN12Q6ZSI9 719 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 TRIM67Q6ZTA4 783 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 BRAPQ7Z569 592 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 LRRC49Q8IUZ0 686 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 CCDC85AQ96PX6 553 aaPredicted RBP5.62□□□□□ -1.51
NF1-216ENST00000495910 EFCAB5A4FU69 1503 aa5.62□□□□□ -1.51
NF1-216ENST00000495910 C16orf96A6NNT2 1141 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 XPOTO43592 962 aaKnown RBP5.61□□□□□ -1.51
NF1-216ENST00000495910 TRIM27P14373 513 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 MAGEA9P43362 315 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 OCRLQ01968 901 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 YWHAHQ04917 246 aaPredicted RBP5.61□□□□□ -1.51
NF1-216ENST00000495910 FOXD4Q12950 439 aaPredicted RBP5.61□□□□□ -1.51
NF1-216ENST00000495910 IFIT5Q13325 482 aaKnown RBP5.61□□□□□ -1.51
NF1-216ENST00000495910 LRRC8EQ6NSJ5 796 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 ESR2Q92731 530 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 TTC25Q96NG3 672 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 TMEM60Q9H2L4 133 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 TRPC6Q9Y210 931 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 IPO5O00410 1097 aaKnown RBP5.61□□□□□ -1.51
NF1-216ENST00000495910 IFNAR2P48551 515 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 OLFML2BQ68BL8 750 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 SYT2Q8N9I0 419 aaPredicted RBP5.61□□□□□ -1.51
NF1-216ENST00000495910 EFHD2Q96C19 240 aaPredicted RBP5.61□□□□□ -1.51
NF1-216ENST00000495910 TMX3Q96JJ7 454 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 PSMB7Q99436 277 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 DPH5Q9H2P9 285 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 PKD2L2Q9NZM6 624 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.61□□□□□ -1.51
NF1-216ENST00000495910 TRAF3IP3Q9Y228 551 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 POC1B-GALNT4F8VUJ3 575 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 BACH1O14867 736 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 TEX28O15482 410 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 PJA2O43164 708 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 TOM1L1O75674 476 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 ATL3Q6DD88 541 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 CDR2LQ86X02 465 aaPredicted RBP5.61□□□□□ -1.51
NF1-216ENST00000495910 SYNRGQ9UMZ2 1314 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 BTBD11A6QL63 1104 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 PSMC6P62333 389 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 PDE4DQ08499 809 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 CYTH1Q15438 398 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 KIF19Q2TAC6 998 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 FGD2Q7Z6J4 655 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 VPS37AQ8NEZ2 397 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 CDC26Q8NHZ8 85 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.61□□□□□ -1.513e-9■■■■■ 78.5
NF1-216ENST00000495910 FAM96AQ9H5X1 160 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 ZBTB21Q9ULJ3 1066 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 FIS1Q9Y3D6 152 aa5.61□□□□□ -1.51
NF1-216ENST00000495910 TSC22D2O75157 780 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms