RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 RGS2P41220 211 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 MCM2P49736 904 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 GRB14Q14449 540 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 SLC35G1Q2M3R5 365 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 USH1GQ495M9 461 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.79■□□□□ 0.76
HDAC6-235ENST00000495515 ANKRD35Q8N283 1001 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 PIBF1Q8WXW3 757 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 DDX11Q96FC9 970 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 MAF1Q9H063 256 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 PCDHA1Q9Y5I3 950 aa19.79■□□□□ 0.76
HDAC6-235ENST00000495515 IFNAR1P17181 557 aa19.78■□□□□ 0.76
HDAC6-235ENST00000495515 FLT3LGP49771 235 aa19.78■□□□□ 0.76
HDAC6-235ENST00000495515 PRKCZQ05513 592 aa19.78■□□□□ 0.76
HDAC6-235ENST00000495515 MAP2K5Q13163 448 aa19.78■□□□□ 0.76
HDAC6-235ENST00000495515 MORN1Q5T089 497 aa19.78■□□□□ 0.76
HDAC6-235ENST00000495515 DPP9Q86TI2 863 aa19.78■□□□□ 0.76
HDAC6-235ENST00000495515 TRIM22Q8IYM9 498 aa19.78■□□□□ 0.76
HDAC6-235ENST00000495515 RAET1EQ8TD07 263 aa19.78■□□□□ 0.76
HDAC6-235ENST00000495515 NCOA5Q9HCD5 579 aaKnown RBP19.78■□□□□ 0.76
HDAC6-235ENST00000495515 GJD2Q9UKL4 321 aa19.78■□□□□ 0.76
HDAC6-235ENST00000495515 CNTNAP5Q8WYK1 1306 aa19.77■□□□□ 0.76
HDAC6-235ENST00000495515 ADORA2AP29274 412 aa19.77■□□□□ 0.76
HDAC6-235ENST00000495515 CAP1Q01518 475 aa19.77■□□□□ 0.76
HDAC6-235ENST00000495515 FUT2Q10981 343 aa19.77■□□□□ 0.76
HDAC6-235ENST00000495515 IRF5Q13568 498 aa19.77■□□□□ 0.76
HDAC6-235ENST00000495515 FBXO46Q6PJ61 603 aaPredicted RBP19.77■□□□□ 0.76
HDAC6-235ENST00000495515 MCF2L2Q86YR7 1114 aa19.77■□□□□ 0.76
HDAC6-235ENST00000495515 RNF26Q9BY78 433 aaPredicted RBP19.77■□□□□ 0.76
HDAC6-235ENST00000495515 SH2B1Q9NRF2 756 aaPredicted RBP19.77■□□□□ 0.76
HDAC6-235ENST00000495515 PTPN22Q9Y2R2 807 aa19.77■□□□□ 0.76
HDAC6-235ENST00000495515 V9GY48 417 aaPredicted RBP19.77■□□□□ 0.76
HDAC6-235ENST00000495515 PFASO15067 1338 aa19.76■□□□□ 0.75
HDAC6-235ENST00000495515 hCG_1984214I3L0E3 225 aa19.76■□□□□ 0.75
HDAC6-235ENST00000495515 XRCC5P13010 732 aaKnown RBP19.76■□□□□ 0.75
HDAC6-235ENST00000495515 SCRN1Q12765 414 aa19.76■□□□□ 0.75
HDAC6-235ENST00000495515 ME3Q16798 604 aa19.76■□□□□ 0.75
HDAC6-235ENST00000495515 TRMT44Q8IYL2 757 aaKnown RBP19.76■□□□□ 0.75
HDAC6-235ENST00000495515 ZNF713Q8N859 430 aaPredicted RBP19.76■□□□□ 0.75
HDAC6-235ENST00000495515 GABRQQ9UN88 632 aa19.76■□□□□ 0.75
HDAC6-235ENST00000495515 COL11A1P12107 1806 aaPredicted RBP19.75■□□□□ 0.75
HDAC6-235ENST00000495515 PRPF3O43395 683 aaKnown RBP19.75■□□□□ 0.75
HDAC6-235ENST00000495515 PPP1R11O60927 126 aaPredicted RBP19.75■□□□□ 0.75
HDAC6-235ENST00000495515 HOXC6P09630 235 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 CYP2B6P20813 491 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 SSRP1Q08945 709 aaKnown RBP19.75■□□□□ 0.75
HDAC6-235ENST00000495515 NTRK3Q16288 839 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 MUM1L1Q5H9M0 696 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 NSMFQ6X4W1 530 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 RGS22Q8NE09 1264 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 USP6NLQ92738 828 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 GTF3C6Q969F1 213 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 APBA2Q99767 749 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 MCOLN1Q9GZU1 580 aa19.75■□□□□ 0.75
HDAC6-235ENST00000495515 POTEB2H3BUK9 544 aa19.74■□□□□ 0.75
HDAC6-235ENST00000495515 HEATR3Q7Z4Q2 680 aa19.74■□□□□ 0.75
HDAC6-235ENST00000495515 SAMD3Q8N6K7 520 aa19.74■□□□□ 0.75
HDAC6-235ENST00000495515 PXYLP1Q8TE99 480 aa19.74■□□□□ 0.75
HDAC6-235ENST00000495515 CLEC4DQ8WXI8 215 aa19.74■□□□□ 0.75
HDAC6-235ENST00000495515 SLC26A6Q9BXS9 759 aa19.74■□□□□ 0.75
HDAC6-235ENST00000495515 A1CFQ9NQ94 594 aaKnown RBP19.74■□□□□ 0.75
HDAC6-235ENST00000495515 DIS3Q9Y2L1 958 aaKnown RBP19.74■□□□□ 0.75
HDAC6-235ENST00000495515 hCG_1642624A0A1W2PR95 340 aa19.73■□□□□ 0.75
HDAC6-235ENST00000495515 PTPDC1A2A3K4 754 aa19.73■□□□□ 0.75
HDAC6-235ENST00000495515 NFIBO00712 420 aa19.73■□□□□ 0.75
HDAC6-235ENST00000495515 TAL1P17542 331 aaPredicted RBP19.73■□□□□ 0.75
HDAC6-235ENST00000495515 PFKFB3Q16875 520 aaPredicted RBP19.73■□□□□ 0.75
HDAC6-235ENST00000495515 RNF207Q6ZRF8 634 aa19.73■□□□□ 0.75
HDAC6-235ENST00000495515 NECAB1Q8N987 351 aa19.73■□□□□ 0.75
HDAC6-235ENST00000495515 SLAIN1Q8ND83 568 aa19.73■□□□□ 0.75
HDAC6-235ENST00000495515 PHKBQ93100 1093 aa19.73■□□□□ 0.75
HDAC6-235ENST00000495515 MAP3K20Q9NYL2 800 aaKnown RBP19.73■□□□□ 0.75
HDAC6-235ENST00000495515 CYP39A1Q9NYL5 469 aa19.73■□□□□ 0.75
HDAC6-235ENST00000495515 PTCH2Q9Y6C5 1203 aa19.73■□□□□ 0.75
HDAC6-235ENST00000495515 ADCY3O60266 1144 aa19.72■□□□□ 0.75
HDAC6-235ENST00000495515 DEXIO95424 95 aa19.72■□□□□ 0.75
HDAC6-235ENST00000495515 LARGE1O95461 756 aa19.72■□□□□ 0.75
HDAC6-235ENST00000495515 PGK2P07205 417 aa19.72■□□□□ 0.75
HDAC6-235ENST00000495515 SCG2P13521 617 aa19.72■□□□□ 0.75
HDAC6-235ENST00000495515 PPP1R18Q6NYC8 613 aa19.72■□□□□ 0.75
HDAC6-235ENST00000495515 CCDC12Q8WUD4 166 aaPredicted RBP19.72■□□□□ 0.75
HDAC6-235ENST00000495515 DNAJC25-GNG10A0A024R161 153 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 CCDC85CA6NKD9 419 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 COBLO75128 1261 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 GRK4P32298 578 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 NAPAP54920 295 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 BAATQ14032 418 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-235ENST00000495515 TEX2Q8IWB9 1127 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 WASF1Q92558 559 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 CUL5Q93034 780 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 GLT8D2Q9H1C3 349 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 BARHL2Q9NY43 387 aa19.71■□□□□ 0.75
HDAC6-235ENST00000495515 ADD3Q9UEY8 706 aaKnown RBP19.71■□□□□ 0.75
HDAC6-235ENST00000495515 GCOM1H8Y6P7 765 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-235ENST00000495515 CFBP00751 764 aa19.7■□□□□ 0.74
HDAC6-235ENST00000495515 POLR2MP0CAP2 368 aa19.7■□□□□ 0.74
HDAC6-235ENST00000495515 CALML3P27482 149 aa19.7■□□□□ 0.74
HDAC6-235ENST00000495515 RPS6P62753 249 aaKnown RBP19.7■□□□□ 0.74
HDAC6-235ENST00000495515 ZNF792Q3KQV3 632 aa19.7■□□□□ 0.74
HDAC6-235ENST00000495515 SLC9C1Q4G0N8 1177 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms