RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 LAMA4Q16363 1823 aa16.72■□□□□ 0.27
RPRD1B-206ENST00000495457 SZT2Q5T011 3432 aa16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 SMCHD1A6NHR9 2005 aa16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 A0A1W2PQ45 241 aaPredicted RBP16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 A0A1W2PQY0 241 aa16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 DUSP11O75319 330 aaKnown RBP16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 BAATQ14032 418 aaPredicted RBP16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 CCDC178Q5BJE1 867 aa16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 KLHDC9Q8NEP7 349 aa16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 KRT23Q9C075 422 aa16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 UBE2OQ9C0C9 1292 aaKnown RBP16.71■□□□□ 0.27
RPRD1B-206ENST00000495457 LAMA3Q16787 3333 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 DNAH12Q6ZR08 3092 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 ASB14A6NK59 587 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 SGSM2O43147 1006 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 CYP21A2P08686 494 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 PTGS1P23219 599 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 GPATCH4Q5T3I0 446 aaKnown RBP16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 CCSAPQ6IQ19 270 aaPredicted RBP16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 EEPD1Q7L9B9 569 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 CLEC4DQ8WXI8 215 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 LRCH3Q96II8 777 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 CNNM2Q9H8M5 875 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 PRDM5Q9NQX1 630 aaPredicted RBP16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 TAF6LQ9Y6J9 622 aa16.7■□□□□ 0.26
RPRD1B-206ENST00000495457 PTPDC1A2A3K4 754 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 C6orf222P0C671 652 aaPredicted RBP16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 ACLYP53396 1101 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 TLE2Q04725 743 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 KCNA10Q16322 511 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 C1orf53Q5VUE5 145 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 SLC30A10Q6XR72 485 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 SH3RF1Q7Z6J0 888 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 FBXO16Q8IX29 292 aaPredicted RBP16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 TDHQ8IZJ6 230 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 UBAC1Q9BSL1 405 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 TSEN34Q9BSV6 310 aaKnown RBP16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 PDGFCQ9NRA1 345 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 PRKAG2Q9UGJ0 569 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 WDR19Q8NEZ3 1342 aa16.69■□□□□ 0.26
RPRD1B-206ENST00000495457 CALML3P27482 149 aa16.68■□□□□ 0.26
RPRD1B-206ENST00000495457 GJA9P57773 515 aa16.68■□□□□ 0.26
RPRD1B-206ENST00000495457 TNFAIP2Q03169 654 aa16.68■□□□□ 0.26
RPRD1B-206ENST00000495457 USH1GQ495M9 461 aa16.68■□□□□ 0.26
RPRD1B-206ENST00000495457 TMEM63BQ5T3F8 832 aa16.68■□□□□ 0.26
RPRD1B-206ENST00000495457 LBHD1Q9BQE6 289 aaPredicted RBP16.68■□□□□ 0.26
RPRD1B-206ENST00000495457 UPF3AQ9H1J1 476 aaKnown RBP16.68■□□□□ 0.26
RPRD1B-206ENST00000495457 STARD7Q9NQZ5 370 aa16.68■□□□□ 0.26
RPRD1B-206ENST00000495457 PDLIM7Q9NR12 457 aa16.68■□□□□ 0.26
RPRD1B-206ENST00000495457 TRIM43BA6NCK2 446 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 MOXD2PA6NHM9 499 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 CTAGE5O15320 804 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 PQBP1O60828 265 aaKnown RBP16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 CST5P28325 142 aaPredicted RBP16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 ALDH5A1P51649 535 aaPredicted RBP16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 SEC23AQ15436 765 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 CDC37Q16543 378 aaPredicted RBP16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 ASPRV1Q53RT3 343 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 TAPT1Q6NXT6 567 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 RNF207Q6ZRF8 634 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 NOL8Q76FK4 1167 aaKnown RBP16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 ADGRF4Q8IZF3 695 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 MORC4Q8TE76 937 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 TRIM43Q96BQ3 446 aaPredicted RBP16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 SPC25Q9HBM1 224 aa16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
RPRD1B-206ENST00000495457 MCM3APO60318 1980 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 ASGR1P07306 291 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 PARP1P09874 1014 aaKnown RBP16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 SMPD1P17405 629 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 RPS6P62753 249 aaKnown RBP16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 BEX3Q00994 111 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 TRDNQ13061 729 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 GNASQ5JWF2 1037 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 STOX1Q6ZVD7 989 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 STAG2Q8N3U4 1231 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 NUP133Q8WUM0 1156 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 VAT1LQ9HCJ6 419 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 ADD3Q9UEY8 706 aaKnown RBP16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 PNMA2Q9UL42 364 aa16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 GNEQ9Y223 722 aaKnown RBP16.66■□□□□ 0.26
RPRD1B-206ENST00000495457 E7EWF7 191 aa16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 ITGB8P26012 769 aa16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 CHST3Q7LGC8 479 aa16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 PCSK9Q8NBP7 692 aaKnown RBP16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 TBC1D5Q92609 795 aa16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 MAP4K1Q92918 833 aa16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 BADQ92934 168 aa16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 GLT1D1Q96MS3 346 aa16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 JMJD4Q9H9V9 463 aa16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 SENP2Q9HC62 589 aa16.65■□□□□ 0.26
RPRD1B-206ENST00000495457 LCTP09848 1927 aa16.64■□□□□ 0.26
RPRD1B-206ENST00000495457 DYNC1LI2O43237 492 aaPredicted RBP16.64■□□□□ 0.25
RPRD1B-206ENST00000495457 DHX16O60231 1041 aaKnown RBP16.64■□□□□ 0.25
RPRD1B-206ENST00000495457 CLTBP09497 229 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms