RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 IQUBQ8NA54 791 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 SPC24Q8NBT2 197 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 MTRQ99707 1265 aa18.75■□□□□ 0.59
ATG4B-225ENST00000494465 SCAF8Q9UPN6 1271 aaKnown RBP18.75■□□□□ 0.59
ATG4B-225ENST00000494465 PP2D1A8MPX8 630 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 CASP1P29466 404 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 DPYDQ12882 1025 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 TRIML1Q8N9V2 468 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-225ENST00000494465 TMEM232C9JQI7 657 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 CDC25BP30305 580 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 CAP2P40123 477 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 GMPSP49915 693 aaPredicted RBP18.74■□□□□ 0.59
ATG4B-225ENST00000494465 MRPL12P52815 198 aaKnown RBP18.74■□□□□ 0.59
ATG4B-225ENST00000494465 TEPSINQ96N21 525 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 PYM1Q9BRP8 204 aaKnown RBP18.74■□□□□ 0.59
ATG4B-225ENST00000494465 PSTPIP2Q9H939 334 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 ARHGEF10LQ9HCE6 1279 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 PCDHA1Q9Y5I3 950 aa18.74■□□□□ 0.59
ATG4B-225ENST00000494465 RASA3Q14644 834 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 SYDE2Q5VT97 1194 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 POTEDQ86YR6 584 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 SPICE1Q8N0Z3 855 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 MRFAP1L1Q96HT8 127 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 ZNF830Q96NB3 372 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-225ENST00000494465 MTMR9Q96QG7 549 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 CCSER1Q9C0I3 900 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 SMCHD1A6NHR9 2005 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 SMTNL1A8MU46 457 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 SNAP25P60880 206 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 KARSQ15046 597 aaKnown RBP18.73■□□□□ 0.59
ATG4B-225ENST00000494465 NAALADL2Q58DX5 795 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 MICALL2Q8IY33 904 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 DPF2Q92785 391 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 CCDC34Q96HJ3 373 aa18.73■□□□□ 0.59
ATG4B-225ENST00000494465 SLC37A4O43826 429 aa18.72■□□□□ 0.59
ATG4B-225ENST00000494465 TDP2O95551 362 aa18.72■□□□□ 0.59
ATG4B-225ENST00000494465 MSNP26038 577 aaKnown RBP18.72■□□□□ 0.59
ATG4B-225ENST00000494465 STAMQ92783 540 aa18.72■□□□□ 0.59
ATG4B-225ENST00000494465 TTC12Q9H892 705 aaPredicted RBP18.72■□□□□ 0.59
ATG4B-225ENST00000494465 DISC1Q9NRI5 854 aa18.72■□□□□ 0.59
ATG4B-225ENST00000494465 PHF20L1A8MW92 1017 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 SMC2O95347 1197 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 TNNI2P48788 182 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 SAMD7Q7Z3H4 446 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 MLKLQ8NB16 471 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 ASTN2O75129 1339 aaPredicted RBP18.71■□□□□ 0.59
ATG4B-225ENST00000494465 TXLNAP40222 546 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 MYL5Q02045 173 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 LRRC15Q8TF66 581 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 AK8Q96MA6 479 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 AMNQ9BXJ7 453 aa18.71■□□□□ 0.59
ATG4B-225ENST00000494465 USP17L15C9J2P7 530 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 USP17L13C9JLJ4 530 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 USP17L11C9JVI0 530 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 USP17L18D6R9N7 530 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 USP17L22D6RA61 530 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 USP17L17D6RBQ6 530 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 USP17L19D6RCP7 530 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 USP17L20D6RJB6 530 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 USP17L24Q0WX57 530 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 USP17L6PQ6QN14 398 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 GSDMAQ96QA5 445 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 KCNF1Q9H3M0 494 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 NRBP1Q9UHY1 535 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 CNOT7Q9UIV1 285 aaKnown RBP18.7■□□□□ 0.58
ATG4B-225ENST00000494465 PRR12Q9ULL5 1215 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 ZNF541Q9H0D2 1346 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 MEIS2O14770 477 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 ZNF500O60304 480 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-225ENST00000494465 PPP4R3AQ6IN85 833 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 IGSF22Q8N9C0 903 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 MED15Q96RN5 788 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 GLIS2Q9BZE0 524 aaPredicted RBP18.7■□□□□ 0.58
ATG4B-225ENST00000494465 GLT8D2Q9H1C3 349 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 GOPCQ9HD26 462 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 GJA3Q9Y6H8 435 aa18.7■□□□□ 0.58
ATG4B-225ENST00000494465 UBA7P41226 1012 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 FMR1Q06787 632 aaKnown RBP eCLIP18.69■□□□□ 0.58
ATG4B-225ENST00000494465 IKQ13123 557 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-225ENST00000494465 FBXO11Q86XK2 927 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 P2RX7Q99572 595 aaKnown RBP18.69■□□□□ 0.58
ATG4B-225ENST00000494465 DICER1Q9UPY3 1922 aaKnown RBP18.69■□□□□ 0.58
ATG4B-225ENST00000494465 GOLGA6L6A8MZA4 724 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 GTPBP6O43824 516 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-225ENST00000494465 LMOD1P29536 600 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-225ENST00000494465 STAT6P42226 847 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 TECP42680 631 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 STAT2P52630 851 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 CUL4BQ13620 913 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 TNFAIP1Q13829 316 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 CALCRLQ16602 461 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 TBC1D10BQ4KMP7 808 aaPredicted RBP18.69■□□□□ 0.58
ATG4B-225ENST00000494465 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 BLZF1Q9H2G9 400 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 VCPKMTQ9H867 229 aa18.69■□□□□ 0.58
ATG4B-225ENST00000494465 OPLAHO14841 1288 aa18.68■□□□□ 0.58
ATG4B-225ENST00000494465 ATP1A3P13637 1013 aa18.68■□□□□ 0.58
ATG4B-225ENST00000494465 TAL1P17542 331 aaPredicted RBP18.68■□□□□ 0.58
ATG4B-225ENST00000494465 MMTAG2Q9BU76 263 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms