RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CCDC113Q9H0I3 377 aa3.56□□□□□ -1.84
LMNB1-207ENST00000494185 ADAMTS10Q9H324 1103 aa3.56□□□□□ -1.84
LMNB1-207ENST00000494185 PRDM7Q9NQW5 492 aa3.56□□□□□ -1.84
LMNB1-207ENST00000494185 APEX2Q9UBZ4 518 aa3.56□□□□□ -1.84
LMNB1-207ENST00000494185 SUSD2Q9UGT4 822 aa3.56□□□□□ -1.84
LMNB1-207ENST00000494185 DBR1Q9UK59 544 aaKnown RBP3.56□□□□□ -1.84
LMNB1-207ENST00000494185 MINPP1Q9UNW1 487 aa3.56□□□□□ -1.84
LMNB1-207ENST00000494185 GPR55Q9Y2T6 319 aaPredicted RBP3.56□□□□□ -1.84
LMNB1-207ENST00000494185 MSRB2Q9Y3D2 182 aa3.56□□□□□ -1.84
LMNB1-207ENST00000494185 NUB1Q9Y5A7 615 aa3.56□□□□□ -1.84
LMNB1-207ENST00000494185 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 C2orf71A6NGG8 1288 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 H0Y8X5 98 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 HRKO00198 91 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 NRDCO43847 1150 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 NPHS1O60500 1241 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 MAFKO60675 156 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 ADAMTS4O75173 837 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 USP2O75604 605 aaPredicted RBP3.55□□□□□ -1.84
LMNB1-207ENST00000494185 KCNH1O95259 989 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 PAPLNO95428 1278 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 HOXC12P31275 282 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 CTSKP43235 329 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 KCNJ6P48051 423 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 CYP4F8P98187 520 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 RASGRF1Q13972 1273 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 CHRNA2Q15822 529 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 SLC10A6Q3KNW5 377 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 CCDC144BQ3MJ40 725 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 MTERF2Q49AM1 385 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 RALGPS1Q5JS13 557 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 E4F1Q66K89 784 aaPredicted RBP3.55□□□□□ -1.84
LMNB1-207ENST00000494185 TMEM132EQ6IEE7 984 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 WFDC3Q8IUB2 231 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 FBXO15Q8NCQ5 510 aaPredicted RBP3.55□□□□□ -1.84
LMNB1-207ENST00000494185 PANK1Q8TE04 598 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 USP33Q8TEY7 942 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 LINC01599Q8WXQ3 324 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 KCTD13Q8WZ19 329 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 FAM84AQ96KN4 292 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 PTCHD1Q96NR3 888 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 DEPDC7Q96QD5 511 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 LNPKQ9C0E8 428 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 ZSWIM4Q9H7M6 989 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 DCP1AQ9NPI6 582 aaPredicted RBP3.55□□□□□ -1.84
LMNB1-207ENST00000494185 AP5S1Q9NUS5 200 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 ERVK13-1Q9NX77 482 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 SNTG2Q9NY99 539 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 ADAMTS6Q9UKP5 1117 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 COA3Q9Y2R0 106 aaPredicted RBP3.55□□□□□ -1.84
LMNB1-207ENST00000494185 EMC9Q9Y3B6 208 aa3.55□□□□□ -1.84
LMNB1-207ENST00000494185 STXBP3O00186 592 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 RFXAPO00287 272 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 NFIBO00712 420 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 AURKAO14965 403 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 FGF10O15520 208 aaPredicted RBP3.54□□□□□ -1.84
LMNB1-207ENST00000494185 MEFVO15553 781 aaPredicted RBP3.54□□□□□ -1.84
LMNB1-207ENST00000494185 SEMA7AO75326 666 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 SNRPB2P08579 225 aaKnown RBP3.54□□□□□ -1.84
LMNB1-207ENST00000494185 PNLIPP16233 465 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 RASA3Q14644 834 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 BMS1Q14692 1282 aaKnown RBP3.54□□□□□ -1.84
LMNB1-207ENST00000494185 ADGRF1Q5T601 910 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 NFXL1Q6ZNB6 911 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 TRIM59Q8IWR1 403 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 ZNF513Q8N8E2 541 aaPredicted RBP3.54□□□□□ -1.84
LMNB1-207ENST00000494185 NUP43Q8NFH3 380 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 MRFAP1L1Q96HT8 127 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 INTS4Q96HW7 963 aaKnown RBP3.54□□□□□ -1.84
LMNB1-207ENST00000494185 AP5M1Q9H0R1 490 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 NKX2-4Q9H2Z4 354 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 CYP26B1Q9NR63 512 aa3.54□□□□□ -1.84
LMNB1-207ENST00000494185 CDK11AQ9UQ88 783 aaPredicted RBP3.54□□□□□ -1.84
LMNB1-207ENST00000494185 YBX2Q9Y2T7 364 aaKnown RBP3.54□□□□□ -1.84
LMNB1-207ENST00000494185 CCDC163A0A0D9SF12 145 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 TCAF2A6NFQ2 919 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 ITGAVP06756 1048 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 TMEM253P0C7T8 217 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 SSRP1Q08945 709 aaKnown RBP3.53□□□□□ -1.84
LMNB1-207ENST00000494185 MLANAQ16655 118 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 LONRF2Q1L5Z9 754 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 DPY19L1Q2PZI1 675 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 HSF5Q4G112 596 aaPredicted RBP3.53□□□□□ -1.84
LMNB1-207ENST00000494185 BICRALQ6AI39 1079 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 ZNF227Q86WZ6 799 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 DCP2Q8IU60 420 aaKnown RBP3.53□□□□□ -1.84
LMNB1-207ENST00000494185 DDX11Q96FC9 970 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 CDC6Q99741 560 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 AARSD1Q9BTE6 412 aaKnown RBP3.53□□□□□ -1.84
LMNB1-207ENST00000494185 SLC12A9Q9BXP2 914 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 NSUN3Q9H649 340 aaKnown RBP3.53□□□□□ -1.84
LMNB1-207ENST00000494185 PCDH18Q9HCL0 1135 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 PDLIM7Q9NR12 457 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 SIRT5Q9NXA8 310 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 PFDN2Q9UHV9 154 aa3.53□□□□□ -1.84
LMNB1-207ENST00000494185 TRAV20A0A0B4J274 112 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 TMEM82A0PJX8 343 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 FAM221BA6H8Z2 402 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 FADS2P1A8MWK0 482 aa3.52□□□□□ -1.85
LMNB1-207ENST00000494185 PEX10O60683 326 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms