RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 TSGA10IPQ3SY00 556 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 MUM1L1Q5H9M0 696 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 NSMFQ6X4W1 530 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 UBE2Q1Q7Z7E8 422 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 FAM133AQ8N9E0 248 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 ARRDC4Q8NCT1 418 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 TRPV1Q8NER1 839 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 NEK1Q96PY6 1258 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 MAF1Q9H063 256 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 CPVLQ9H3G5 476 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 ABHD16BQ9H3Z7 469 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 C11orf49Q9H6J7 331 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 A1CFQ9NQ94 594 aaKnown RBP8.13□□□□□ -1.11
TOP3A-207ENST00000493648 CYP39A1Q9NYL5 469 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 MAD2L2Q9UI95 211 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 FAM184BQ9ULE4 1060 aa8.13□□□□□ -1.11
TOP3A-207ENST00000493648 HTTP42858 3142 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 SMCHD1A6NHR9 2005 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 ABCB11O95342 1321 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 PTPDC1A2A3K4 754 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 B4DLN1 442 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 SNAI1O95863 264 aaPredicted RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 HMGB1P09429 215 aaKnown RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 ZNF865P0CJ78 1059 aaPredicted RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 CALM1P0DP23 149 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 CALM2P0DP24 149 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 CALM3P0DP25 149 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 RARBP10826 455 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 AKR1A1P14550 325 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 KIF5BP33176 963 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 MRPL12P52815 198 aaKnown RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 TROAPQ12815 778 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 ACVR2BQ13705 512 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 BAATQ14032 418 aaPredicted RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 USH1GQ495M9 461 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 SYNE3Q6ZMZ3 975 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 RNF207Q6ZRF8 634 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 DHX32Q7L7V1 743 aaKnown RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 FBXO11Q86XK2 927 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 MCF2L2Q86YR7 1114 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 CCDC144CPQ8IYA2 1237 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 STAG2Q8N3U4 1231 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 RGS22Q8NE09 1264 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 CTCFLQ8NI51 663 aaPredicted RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 NUP133Q8WUM0 1156 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 MPHOSPH6Q99547 160 aaKnown RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 MAP3K14Q99558 947 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 AMNQ9BXJ7 453 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 JMJD4Q9H9V9 463 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 LY9Q9HBG7 655 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 SENP2Q9HC62 589 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 ADD3Q9UEY8 706 aaKnown RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 ZHX1Q9UKY1 873 aaPredicted RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 MRPL11Q9Y3B7 192 aaKnown RBP8.12□□□□□ -1.11
TOP3A-207ENST00000493648 NR2E3Q9Y5X4 410 aa8.12□□□□□ -1.11
TOP3A-207ENST00000493648 LOC102724159A0A0B4J2E5 919 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 SOWAHBA6NEL2 793 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 KBTBD13C9JR72 458 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 DNM1LO00429 736 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 NFIBO00712 420 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 SH2B2O14492 632 aaPredicted RBP8.11□□□□□ -1.11
TOP3A-207ENST00000493648 ZBTB5O15062 677 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 EPB41L2O43491 1005 aaKnown RBP8.11□□□□□ -1.11
TOP3A-207ENST00000493648 EVI5O60447 810 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 DDAH1O94760 285 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 TAL1P17542 331 aaPredicted RBP8.11□□□□□ -1.11
TOP3A-207ENST00000493648 CALML3P27482 149 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 SMARCA1P28370 1054 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 HSPA4P34932 840 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 LIFRP42702 1097 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 GNAQP50148 359 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 EXOSC10Q01780 885 aaKnown RBP8.11□□□□□ -1.11
TOP3A-207ENST00000493648 PWP2Q15269 919 aaKnown RBP8.11□□□□□ -1.11
TOP3A-207ENST00000493648 QRICH1Q2TAL8 776 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
TOP3A-207ENST00000493648 ANO1Q5XXA6 986 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 ARMCX2Q7L311 632 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 ZNF654Q8IZM8 581 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 DIS3LQ8TF46 1054 aaKnown RBP8.11□□□□□ -1.11
TOP3A-207ENST00000493648 CLEC4DQ8WXI8 215 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 LZTS2Q9BRK4 669 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 RIOX1Q9H6W3 641 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 XPNPEP3Q9NQH7 507 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 SLC12A7Q9Y666 1083 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 MYH6P13533 1939 aa8.11□□□□□ -1.11
TOP3A-207ENST00000493648 PNMA6FA0A0J9YX94 578 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 EIF5BO60841 1220 aaKnown RBP8.1□□□□□ -1.11
TOP3A-207ENST00000493648 DUSP11O75319 330 aaKnown RBP8.1□□□□□ -1.11
TOP3A-207ENST00000493648 ATXN8OSP0DMR3 200 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 PSMA5P28066 241 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 MNX1P50219 401 aaPredicted RBP8.1□□□□□ -1.11
TOP3A-207ENST00000493648 RPS6P62753 249 aaKnown RBP8.1□□□□□ -1.11
TOP3A-207ENST00000493648 FGD1P98174 961 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 ADCK5Q3MIX3 580 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 GJC2Q5T442 439 aaPredicted RBP8.1□□□□□ -1.11
TOP3A-207ENST00000493648 RNF180Q86T96 592 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 RASEFQ8IZ41 740 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 SAMD3Q8N6K7 520 aa8.1□□□□□ -1.11
TOP3A-207ENST00000493648 FANCBQ8NB91 859 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms