RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 ERO1AQ96HE7 468 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 RNF26Q9BY78 433 aaPredicted RBP14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 MROH8Q9H579 483 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 SEC63Q9UGP8 760 aaKnown RBP14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 GJD2Q9UKL4 321 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 PCDHA1Q9Y5I3 950 aa14.01□□□□□ -0.17
RHBDF1-211ENST00000493647 ABCB11O95342 1321 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 PTPDC1A2A3K4 754 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 TNPO2O14787 897 aaKnown RBP14□□□□□ -0.17
RHBDF1-211ENST00000493647 FDPSP14324 419 aaKnown RBP14□□□□□ -0.17
RHBDF1-211ENST00000493647 PTPREP23469 700 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 COPB2P35606 906 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 SSRP1Q08945 709 aaKnown RBP14□□□□□ -0.17
RHBDF1-211ENST00000493647 PFKFB3Q16875 520 aaPredicted RBP14□□□□□ -0.17
RHBDF1-211ENST00000493647 MORN1Q5T089 497 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 TBC1D5Q92609 795 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 USP6NLQ92738 828 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 AIFM3Q96NN9 605 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 ACAD9Q9H845 621 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 GABRQQ9UN88 632 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 PCNTO95613 3336 aa14□□□□□ -0.17
RHBDF1-211ENST00000493647 STK36Q9NRP7 1315 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 SMCHD1A6NHR9 2005 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 STXBP3O00186 592 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 SCG2P13521 617 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 GRB14Q14449 540 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 KIF22Q14807 665 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 CPLX2Q6PUV4 134 aaKnown RBP13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 OTOP1Q7RTM1 612 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 HEATR3Q7Z4Q2 680 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 CCAR1Q8IX12 1150 aaKnown RBP13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 SMARCC2Q8TAQ2 1214 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 A1CFQ9NQ94 594 aaKnown RBP13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 FBXO40Q9UH90 709 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 PNMA2Q9UL42 364 aa13.99□□□□□ -0.17
RHBDF1-211ENST00000493647 SLC15A5A6NIM6 579 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 K7ELQ4 463 aaPredicted RBP13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 COBLO75128 1261 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 CDKL5O76039 1030 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 PGK2P07205 417 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 ADORA2AP29274 412 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 PRKCZQ05513 592 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 CUL4AQ13619 759 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 NSMFQ6X4W1 530 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 SLC30A10Q6XR72 485 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 ABRAQ8N0Z2 381 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 DDX11Q96FC9 970 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 MMP19Q99542 508 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 LLPHQ9BRT6 129 aaKnown RBP13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 BARHL2Q9NY43 387 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 ORC3Q9UBD5 711 aaPredicted RBP13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 SRRDQ9UH36 339 aa13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 MRPL11Q9Y3B7 192 aaKnown RBP13.98□□□□□ -0.17
RHBDF1-211ENST00000493647 DNAJC25-GNG10A0A024R161 153 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 ADAMTS3O15072 1205 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 DEXIO95424 95 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 FCER1AP12319 257 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 AKAP17AQ02040 695 aaKnown RBP13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 MAP2K5Q13163 448 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 TRIM22Q8IYM9 498 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 FGD4Q96M96 766 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 PURBQ96QR8 312 aaKnown RBP13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 PRDM10Q9NQV6 1147 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 CYP39A1Q9NYL5 469 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 TRIM17Q9Y577 477 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 IVNS1ABPQ9Y6Y0 642 aa13.97□□□□□ -0.17
RHBDF1-211ENST00000493647 ASTN1O14525 1302 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 hCG_1984214I3L0E3 225 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 STRNO43815 780 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 FLT3LGP49771 235 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 NAPAP54920 295 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 CNTN2Q02246 1040 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 GHRHRQ02643 423 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 KCTD2Q14681 263 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 ZNF792Q3KQV3 632 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 ANKRD35Q8N283 1001 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 ZNF713Q8N859 430 aaPredicted RBP13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 RGS22Q8NE09 1264 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 NPLOC4Q8TAT6 608 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 GJB4Q9NTQ9 266 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 VPS54Q9P1Q0 977 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 COL20A1Q9P218 1284 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 PLXNB2O15031 1838 aa13.96□□□□□ -0.17
RHBDF1-211ENST00000493647 CASP8AP2Q9UKL3 1982 aa13.96□□□□□ -0.18
RHBDF1-211ENST00000493647 SOWAHBA6NEL2 793 aa13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 GNRH1P01148 92 aa13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 CYP2B6P20813 491 aa13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 HOXA13P31271 388 aaPredicted RBP13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 HSD17B4P51659 736 aa13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 RPS6P62753 249 aaKnown RBP13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 TRAF1Q13077 416 aa13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 CCL14Q16627 93 aa13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 PPP1R18Q6NYC8 613 aa13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 RNF207Q6ZRF8 634 aa13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 CTU1Q7Z7A3 348 aaKnown RBP13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
RHBDF1-211ENST00000493647 FAM133AQ8N9E0 248 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms