RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 BMP8BP34820 402 aa21.13■□□□□ 0.97
PTPRU-207ENST00000492954 TRIM60Q495X7 471 aa21.13■□□□□ 0.97
PTPRU-207ENST00000492954 GPATCH4Q5T3I0 446 aaKnown RBP21.13■□□□□ 0.97
PTPRU-207ENST00000492954 PURBQ96QR8 312 aaKnown RBP21.13■□□□□ 0.97
PTPRU-207ENST00000492954 UBAC1Q9BSL1 405 aa21.13■□□□□ 0.97
PTPRU-207ENST00000492954 ASB14A6NK59 587 aa21.12■□□□□ 0.97
PTPRU-207ENST00000492954 SGSM2O43147 1006 aa21.12■□□□□ 0.97
PTPRU-207ENST00000492954 DUSP11O75319 330 aaKnown RBP21.12■□□□□ 0.97
PTPRU-207ENST00000492954 BAATQ14032 418 aaPredicted RBP21.12■□□□□ 0.97
PTPRU-207ENST00000492954 SNX17Q15036 470 aa21.12■□□□□ 0.97
PTPRU-207ENST00000492954 CYB5R4Q7L1T6 521 aa21.12■□□□□ 0.97
PTPRU-207ENST00000492954 UBA5Q9GZZ9 404 aa21.12■□□□□ 0.97
PTPRU-207ENST00000492954 MCM3APO60318 1980 aa21.11■□□□□ 0.97
PTPRU-207ENST00000492954 MYADML2A6NDP7 307 aa21.11■□□□□ 0.97
PTPRU-207ENST00000492954 CYP21A2P08686 494 aa21.11■□□□□ 0.97
PTPRU-207ENST00000492954 IRX5P78411 483 aaPredicted RBP21.11■□□□□ 0.97
PTPRU-207ENST00000492954 MDM2Q00987 491 aaPredicted RBP21.11■□□□□ 0.97
PTPRU-207ENST00000492954 KLHDC9Q8NEP7 349 aa21.11■□□□□ 0.97
PTPRU-207ENST00000492954 CLEC4DQ8WXI8 215 aa21.11■□□□□ 0.97
PTPRU-207ENST00000492954 A0A1W2PQ45 241 aaPredicted RBP21.1■□□□□ 0.97
PTPRU-207ENST00000492954 A0A1W2PQY0 241 aa21.1■□□□□ 0.97
PTPRU-207ENST00000492954 TSEN34Q9BSV6 310 aaKnown RBP21.1■□□□□ 0.97
PTPRU-207ENST00000492954 UBE2OQ9C0C9 1292 aaKnown RBP21.1■□□□□ 0.97
PTPRU-207ENST00000492954 TAF6LQ9Y6J9 622 aa21.1■□□□□ 0.97
PTPRU-207ENST00000492954 U3KPZ7 1027 aaPredicted RBP21.1■□□□□ 0.97
PTPRU-207ENST00000492954 WDR19Q8NEZ3 1342 aa21.09■□□□□ 0.97
PTPRU-207ENST00000492954 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.09■□□□□ 0.97
PTPRU-207ENST00000492954 PTPDC1A2A3K4 754 aa21.09■□□□□ 0.97
PTPRU-207ENST00000492954 C6orf222P0C671 652 aaPredicted RBP21.09■□□□□ 0.97
PTPRU-207ENST00000492954 KCNA10Q16322 511 aa21.09■□□□□ 0.97
PTPRU-207ENST00000492954 ASPRV1Q53RT3 343 aa21.09■□□□□ 0.97
PTPRU-207ENST00000492954 IFIT1BQ5T764 474 aaKnown RBP21.09■□□□□ 0.97
PTPRU-207ENST00000492954 CCSAPQ6IQ19 270 aaPredicted RBP21.09■□□□□ 0.97
PTPRU-207ENST00000492954 SLC30A10Q6XR72 485 aa21.09■□□□□ 0.97
PTPRU-207ENST00000492954 SKAP1Q86WV1 359 aa21.09■□□□□ 0.97
PTPRU-207ENST00000492954 PNMA2Q9UL42 364 aa21.09■□□□□ 0.97
PTPRU-207ENST00000492954 SOX1O00570 391 aaPredicted RBP21.08■□□□□ 0.97
PTPRU-207ENST00000492954 PARP1P09874 1014 aaKnown RBP21.08■□□□□ 0.97
PTPRU-207ENST00000492954 ACLYP53396 1101 aa21.08■□□□□ 0.97
PTPRU-207ENST00000492954 TRDNQ13061 729 aa21.08■□□□□ 0.97
PTPRU-207ENST00000492954 SEC23AQ15436 765 aa21.08■□□□□ 0.97
PTPRU-207ENST00000492954 CDC37Q16543 378 aaPredicted RBP21.08■□□□□ 0.97
PTPRU-207ENST00000492954 USH1GQ495M9 461 aa21.08■□□□□ 0.97
PTPRU-207ENST00000492954 C1orf53Q5VUE5 145 aa21.08■□□□□ 0.97
PTPRU-207ENST00000492954 EEPD1Q7L9B9 569 aa21.08■□□□□ 0.97
PTPRU-207ENST00000492954 FBXO16Q8IX29 292 aaPredicted RBP21.08■□□□□ 0.97
PTPRU-207ENST00000492954 ADGRF4Q8IZF3 695 aa21.08■□□□□ 0.97
PTPRU-207ENST00000492954 UPF3AQ9H1J1 476 aaKnown RBP21.08■□□□□ 0.97
PTPRU-207ENST00000492954 PRKAG2Q9UGJ0 569 aa21.08■□□□□ 0.97
PTPRU-207ENST00000492954 MOXD2PA6NHM9 499 aa21.07■□□□□ 0.96
PTPRU-207ENST00000492954 CALML3P27482 149 aa21.07■□□□□ 0.96
PTPRU-207ENST00000492954 CST5P28325 142 aaPredicted RBP21.07■□□□□ 0.96
PTPRU-207ENST00000492954 ALDH5A1P51649 535 aaPredicted RBP21.07■□□□□ 0.96
PTPRU-207ENST00000492954 GJA9P57773 515 aa21.07■□□□□ 0.96
PTPRU-207ENST00000492954 TNFAIP2Q03169 654 aa21.07■□□□□ 0.96
PTPRU-207ENST00000492954 TLE2Q04725 743 aa21.07■□□□□ 0.96
PTPRU-207ENST00000492954 NOL8Q76FK4 1167 aaKnown RBP21.07■□□□□ 0.96
PTPRU-207ENST00000492954 MORC4Q8TE76 937 aa21.07■□□□□ 0.96
PTPRU-207ENST00000492954 LBHD1Q9BQE6 289 aaPredicted RBP21.07■□□□□ 0.96
PTPRU-207ENST00000492954 SPC25Q9HBM1 224 aa21.07■□□□□ 0.96
PTPRU-207ENST00000492954 PRDM5Q9NQX1 630 aaPredicted RBP21.07■□□□□ 0.96
PTPRU-207ENST00000492954 PDLIM7Q9NR12 457 aa21.07■□□□□ 0.96
PTPRU-207ENST00000492954 PDGFCQ9NRA1 345 aa21.07■□□□□ 0.96
PTPRU-207ENST00000492954 ADD3Q9UEY8 706 aaKnown RBP21.07■□□□□ 0.96
PTPRU-207ENST00000492954 LCTP09848 1927 aa21.06■□□□□ 0.96
PTPRU-207ENST00000492954 E7EWF7 191 aa21.06■□□□□ 0.96
PTPRU-207ENST00000492954 PTGS1P23219 599 aa21.06■□□□□ 0.96
PTPRU-207ENST00000492954 RPS6P62753 249 aaKnown RBP21.06■□□□□ 0.96
PTPRU-207ENST00000492954 TAPT1Q6NXT6 567 aa21.06■□□□□ 0.96
PTPRU-207ENST00000492954 RNF207Q6ZRF8 634 aa21.06■□□□□ 0.96
PTPRU-207ENST00000492954 STOX1Q6ZVD7 989 aa21.06■□□□□ 0.96
PTPRU-207ENST00000492954 TDHQ8IZJ6 230 aa21.06■□□□□ 0.96
PTPRU-207ENST00000492954 MAP4K1Q92918 833 aa21.06■□□□□ 0.96
PTPRU-207ENST00000492954 STARD7Q9NQZ5 370 aa21.06■□□□□ 0.96
PTPRU-207ENST00000492954 RBM8AQ9Y5S9 174 aaKnown RBP21.06■□□□□ 0.96
PTPRU-207ENST00000492954 LRRC37A2A6NM11 1700 aa21.05■□□□□ 0.96
PTPRU-207ENST00000492954 CTAGE5O15320 804 aa21.05■□□□□ 0.96
PTPRU-207ENST00000492954 CENPQQ7L2Z9 268 aaPredicted RBP21.05■□□□□ 0.96
PTPRU-207ENST00000492954 SH3RF1Q7Z6J0 888 aa21.05■□□□□ 0.96
PTPRU-207ENST00000492954 STAG2Q8N3U4 1231 aa21.05■□□□□ 0.96
PTPRU-207ENST00000492954 NUP133Q8WUM0 1156 aa21.05■□□□□ 0.96
PTPRU-207ENST00000492954 LRCH3Q96II8 777 aa21.05■□□□□ 0.96
PTPRU-207ENST00000492954 VAT1LQ9HCJ6 419 aa21.05■□□□□ 0.96
PTPRU-207ENST00000492954 GNEQ9Y223 722 aaKnown RBP21.05■□□□□ 0.96
PTPRU-207ENST00000492954 DHX16O60231 1041 aaKnown RBP21.04■□□□□ 0.96
PTPRU-207ENST00000492954 PQBP1O60828 265 aaKnown RBP21.04■□□□□ 0.96
PTPRU-207ENST00000492954 ASGR1P07306 291 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 SMPD1P17405 629 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 BEX3Q00994 111 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 QRICH1Q2TAL8 776 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 GNASQ5JWF2 1037 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 TMEM63BQ5T3F8 832 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 RALYLQ86SE5 291 aaKnown RBP21.04■□□□□ 0.96
PTPRU-207ENST00000492954 TLK2Q86UE8 772 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 PCSK9Q8NBP7 692 aaKnown RBP21.04■□□□□ 0.96
PTPRU-207ENST00000492954 JMJD4Q9H9V9 463 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 SENP2Q9HC62 589 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 VTA1Q9NP79 307 aa21.04■□□□□ 0.96
PTPRU-207ENST00000492954 TRIM43BA6NCK2 446 aa21.03■□□□□ 0.96
PTPRU-207ENST00000492954 IFIT3O14879 490 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms