RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 SUPT16HQ9Y5B9 1047 aaKnown RBP16.54■□□□□ 0.24
NCK1-211ENST00000491539 ATG2AQ2TAZ0 1938 aa16.54■□□□□ 0.24
NCK1-211ENST00000491539 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 IGFBP4P22692 258 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 COPB2P35606 906 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 RABGGTBP53611 331 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 GJA9P57773 515 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 TFF2Q03403 129 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 PDE4BQ07343 736 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 TMEM63BQ5T3F8 832 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 VPS53Q5VIR6 699 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 ZNF444Q8N0Y2 327 aaPredicted RBP16.53■□□□□ 0.24
NCK1-211ENST00000491539 MSL3Q8N5Y2 521 aaKnown RBP16.53■□□□□ 0.24
NCK1-211ENST00000491539 NEDD1Q8NHV4 660 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 MKL1Q969V6 931 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 CEP95Q96GE4 821 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 FAM227BQ96M60 508 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 OSBPL3Q9H4L5 887 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
NCK1-211ENST00000491539 SIP14410 1827 aa16.53■□□□□ 0.24
NCK1-211ENST00000491539 GRIN2DO15399 1336 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 TRIP12Q14669 1992 aaPredicted RBP16.52■□□□□ 0.24
NCK1-211ENST00000491539 F5H6K3 240 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 PLA2G5P39877 138 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 CNTN2Q02246 1040 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 KLRC3Q07444 240 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 CXCL17Q6UXB2 119 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.52■□□□□ 0.24
NCK1-211ENST00000491539 RASGRP2Q7LDG7 609 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 ZNF467Q7Z7K2 595 aaPredicted RBP16.52■□□□□ 0.24
NCK1-211ENST00000491539 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 LRRC47Q8N1G4 583 aaKnown RBP16.52■□□□□ 0.24
NCK1-211ENST00000491539 HERVK_113Q902F9 699 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 IL23AQ9NPF7 189 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 SYNPO2Q9UMS6 1093 aa16.52■□□□□ 0.24
NCK1-211ENST00000491539 BRWD1Q9NSI6 2320 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 SLC3A2P08195 630 aaKnown RBP16.51■□□□□ 0.23
NCK1-211ENST00000491539 KCNQ1P51787 676 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 ALX1Q15699 326 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 MCMDC2Q4G0Z9 681 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 OTOP2Q7RTS6 562 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 MICALL1Q8N3F8 863 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 TMEM199Q8N511 208 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 KIFC2Q96AC6 838 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 HOMER2Q9NSB8 354 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 CLIP2Q9UDT6 1046 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 ANAPC4Q9UJX5 808 aa16.51■□□□□ 0.23
NCK1-211ENST00000491539 LAMA4Q16363 1823 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 TRIM6-TRIM34B2RNG4 842 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 ATP2A1O14983 1001 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 TTLL1O95922 423 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 TSPY3P0CV98 308 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 TSPY8P0CW00 308 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 CCL23P55773 120 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 MRPS5P82675 430 aaKnown RBP16.5■□□□□ 0.23
NCK1-211ENST00000491539 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
NCK1-211ENST00000491539 RAB30Q15771 203 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 GNASQ5JWF2 1037 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
NCK1-211ENST00000491539 SLC43A3Q8NBI5 491 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 PCSK9Q8NBP7 692 aaKnown RBP16.5■□□□□ 0.23
NCK1-211ENST00000491539 NOC4LQ9BVI4 516 aaKnown RBP16.5■□□□□ 0.23
NCK1-211ENST00000491539 ABHD16BQ9H3Z7 469 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 HIPK3Q9H422 1215 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 SLC38A10Q9HBR0 1119 aa16.5■□□□□ 0.23
NCK1-211ENST00000491539 ZMYM6O95789 1325 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 EPOPA6NHQ4 379 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 ARHGEF15O94989 841 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 FGRP09769 529 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 PSMC6P62333 389 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 TFAP4Q01664 338 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 CTDSPL2Q05D32 466 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 TLK2Q86UE8 772 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 GMCL1P1Q8NEA9 526 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 VTI1AQ96AJ9 217 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 SCLYQ96I15 445 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 TRPV6Q9H1D0 765 aa16.49■□□□□ 0.23
NCK1-211ENST00000491539 ZNF536O15090 1300 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 SOWAHBA6NEL2 793 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 RFXAPO00287 272 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 B4GALT4O60513 344 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 NKX3-2P78367 333 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 PPP2R2DQ66LE6 453 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 KRT40Q6A162 431 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 FAM133AQ8N9E0 248 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 RILPL2Q969X0 211 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 CHMP4CQ96CF2 233 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 A1CFQ9NQ94 594 aaKnown RBP16.48■□□□□ 0.23
NCK1-211ENST00000491539 INCENPQ9NQS7 918 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 MSRAQ9UJ68 235 aa16.48■□□□□ 0.23
NCK1-211ENST00000491539 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
NCK1-211ENST00000491539 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
NCK1-211ENST00000491539 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
NCK1-211ENST00000491539 TLR3O15455 904 aaKnown RBP16.47■□□□□ 0.23
NCK1-211ENST00000491539 ORC4O43929 436 aa16.47■□□□□ 0.23
NCK1-211ENST00000491539 FGAP02671 866 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms