RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SPATC1LQ9H0A9 340 aa21.44■■□□□ 1.02
MCF2L-230ENST00000491028 H3BQV1 296 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 CA12O43570 354 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 SLC25A27O95847 323 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 DDIT3P35638 169 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 ERVK-9P63128 1117 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 ERVK-24P63145 666 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 PLS1Q14651 629 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 FAM110CQ1W6H9 321 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 KRT40Q6A162 431 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 GALNT17Q6IS24 598 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 RIOX2Q8IUF8 465 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 SHISA4Q96DD7 197 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 ZMYND12Q9H0C1 365 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 GLT8D2Q9H1C3 349 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 TXNRD2Q9NNW7 524 aa21.43■■□□□ 1.02
MCF2L-230ENST00000491028 TLR2O60603 784 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 MMP1P03956 469 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 ALAS1P13196 640 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 GNA11P29992 359 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 NLRP5P59047 1200 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 CCNA1P78396 465 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 DNAJC5GQ8N7S2 189 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 GPRC5AQ8NFJ5 357 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 CFHR5Q9BXR6 569 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 MAF1Q9H063 256 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 C6orf50Q9HD87 102 aa21.42■■□□□ 1.02
MCF2L-230ENST00000491028 SMCHD1A6NHR9 2005 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 STX6O43752 255 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 FOSBP53539 338 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 SAMD3Q8N6K7 520 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 ANKRD13CQ8N6S4 541 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 DAGLBQ8NCG7 672 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 SHCBP1Q8NEM2 672 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 CHST13Q8NET6 341 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 BICD2Q8TD16 824 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 MOV10L1Q9BXT6 1211 aaKnown RBP21.41■■□□□ 1.02
MCF2L-230ENST00000491028 BRMS1Q9HCU9 246 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 GJB4Q9NTQ9 266 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 RNF146Q9NTX7 359 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 FBXO40Q9UH90 709 aa21.41■■□□□ 1.02
MCF2L-230ENST00000491028 CIZ1Q9ULV3 898 aaPredicted RBP21.41■■□□□ 1.02
MCF2L-230ENST00000491028 SMCO2A6NFE2 343 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 BCRP11274 1271 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 ADCY7P51828 1080 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 CRHR2Q13324 411 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 SAFBQ15424 915 aaKnown RBP eCLIP21.4■■□□□ 1.02
MCF2L-230ENST00000491028 C17orf99Q6UX52 265 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 MCF2L2Q86YR7 1114 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 CUL5Q93034 780 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 TRERF1Q96PN7 1200 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 ACAD9Q9H845 621 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 RIC8AQ9NPQ8 531 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 PCDHA4Q9UN74 947 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 KCNJ14Q9UNX9 436 aa21.4■■□□□ 1.02
MCF2L-230ENST00000491028 VPS37CA5D8V6 355 aaPredicted RBP21.39■■□□□ 1.01
MCF2L-230ENST00000491028 TAL1P17542 331 aaPredicted RBP21.39■■□□□ 1.01
MCF2L-230ENST00000491028 MRPL12P52815 198 aaKnown RBP21.39■■□□□ 1.01
MCF2L-230ENST00000491028 GUCY1B3Q02153 619 aa21.39■■□□□ 1.01
MCF2L-230ENST00000491028 GHRHRQ02643 423 aa21.39■■□□□ 1.01
MCF2L-230ENST00000491028 NPY5RQ15761 445 aa21.39■■□□□ 1.01
MCF2L-230ENST00000491028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.39■■□□□ 1.01
MCF2L-230ENST00000491028 CLEC4DQ8WXI8 215 aa21.39■■□□□ 1.01
MCF2L-230ENST00000491028 MROH8Q9H579 483 aa21.39■■□□□ 1.01
MCF2L-230ENST00000491028 PSTPIP2Q9H939 334 aa21.39■■□□□ 1.01
MCF2L-230ENST00000491028 MAP3K20Q9NYL2 800 aaKnown RBP21.39■■□□□ 1.01
MCF2L-230ENST00000491028 RIPK3Q9Y572 518 aa21.39■■□□□ 1.01
MCF2L-230ENST00000491028 OPLAHO14841 1288 aa21.38■■□□□ 1.01
MCF2L-230ENST00000491028 KRT2P35908 639 aa21.38■■□□□ 1.01
MCF2L-230ENST00000491028 NUCB2P80303 420 aa21.38■■□□□ 1.01
MCF2L-230ENST00000491028 Q3C1V9 767 aa21.38■■□□□ 1.01
MCF2L-230ENST00000491028 MCTP2Q6DN12 878 aa21.38■■□□□ 1.01
MCF2L-230ENST00000491028 DIS3L2Q8IYB7 885 aaKnown RBP21.38■■□□□ 1.01
MCF2L-230ENST00000491028 BLIDQ8IZY5 108 aa21.38■■□□□ 1.01
MCF2L-230ENST00000491028 HOMER2Q9NSB8 354 aa21.38■■□□□ 1.01
MCF2L-230ENST00000491028 CPA4Q9UI42 421 aa21.38■■□□□ 1.01
MCF2L-230ENST00000491028 MTMR6Q9Y217 621 aa21.38■■□□□ 1.01
MCF2L-230ENST00000491028 PIK3CDO00329 1044 aa21.37■■□□□ 1.01
MCF2L-230ENST00000491028 NFIBO00712 420 aa21.37■■□□□ 1.01
MCF2L-230ENST00000491028 PEX10O60683 326 aa21.37■■□□□ 1.01
MCF2L-230ENST00000491028 ERCC3P19447 782 aa21.37■■□□□ 1.01
MCF2L-230ENST00000491028 MUM1L1Q5H9M0 696 aa21.37■■□□□ 1.01
MCF2L-230ENST00000491028 NCAPG2Q86XI2 1143 aa21.37■■□□□ 1.01
MCF2L-230ENST00000491028 FOXP1Q9H334 677 aaPredicted RBP21.37■■□□□ 1.01
MCF2L-230ENST00000491028 SAGE1Q9NXZ1 904 aa21.37■■□□□ 1.01
MCF2L-230ENST00000491028 PLXNB2O15031 1838 aa21.36■■□□□ 1.01
MCF2L-230ENST00000491028 GCOM1H8Y6P7 765 aaPredicted RBP21.36■■□□□ 1.01
MCF2L-230ENST00000491028 POLR2MP0CAP2 368 aa21.36■■□□□ 1.01
MCF2L-230ENST00000491028 REXO1Q8N1G1 1221 aaKnown RBP21.36■■□□□ 1.01
MCF2L-230ENST00000491028 RNF186Q9NXI6 227 aa21.36■■□□□ 1.01
MCF2L-230ENST00000491028 CHMP5Q9NZZ3 219 aa21.36■■□□□ 1.01
MCF2L-230ENST00000491028 ZNF236Q9UL36 1845 aa21.35■■□□□ 1.01
MCF2L-230ENST00000491028 M0R2N6 131 aa21.35■■□□□ 1.01
MCF2L-230ENST00000491028 MEIS2O14770 477 aa21.35■■□□□ 1.01
MCF2L-230ENST00000491028 BRD1O95696 1058 aa21.35■■□□□ 1.01
MCF2L-230ENST00000491028 CFBP00751 764 aa21.35■■□□□ 1.01
MCF2L-230ENST00000491028 ZSCAN22P10073 491 aaPredicted RBP21.35■■□□□ 1.01
MCF2L-230ENST00000491028 MAPK4P31152 587 aa21.35■■□□□ 1.01
MCF2L-230ENST00000491028 CLK2P49760 499 aaKnown RBP21.35■■□□□ 1.01
MCF2L-230ENST00000491028 HSD17B4P51659 736 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms