RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-213	ENST00000489215	RGS22	Q8NE09	1264 aa		27.99	■■■□□ 2.07
PTPN18-213	ENST00000489215	MPHOSPH6	Q99547	160 aa	Known RBP	27.99	■■■□□ 2.07
PTPN18-213	ENST00000489215	PPP4R2	Q9NY27	417 aa		27.99	■■■□□ 2.07
PTPN18-213	ENST00000489215	CNTN2	Q02246	1040 aa		27.98	■■■□□ 2.07
PTPN18-213	ENST00000489215	CDC37	Q16543	378 aa	Predicted RBP	27.98	■■■□□ 2.07
PTPN18-213	ENST00000489215	CREB3L3	Q68CJ9	461 aa		27.98	■■■□□ 2.07
PTPN18-213	ENST00000489215	CATIP	Q7Z7H3	387 aa		27.98	■■■□□ 2.07
PTPN18-213	ENST00000489215	CCDC144CP	Q8IYA2	1237 aa		27.98	■■■□□ 2.07
PTPN18-213	ENST00000489215	TMEM87B	Q96K49	555 aa		27.98	■■■□□ 2.07
PTPN18-213	ENST00000489215	XPNPEP3	Q9NQH7	507 aa		27.98	■■■□□ 2.07
PTPN18-213	ENST00000489215	ZHX1	Q9UKY1	873 aa	Predicted RBP	27.98	■■■□□ 2.07
PTPN18-213	ENST00000489215	ABCB11	O95342	1321 aa		27.97	■■■□□ 2.07
PTPN18-213	ENST00000489215		B4DLN1	442 aa		27.97	■■■□□ 2.07
PTPN18-213	ENST00000489215	KLRF2	D3W0D1	207 aa		27.97	■■■□□ 2.07
PTPN18-213	ENST00000489215		H0YGN5	161 aa		27.97	■■■□□ 2.07
PTPN18-213	ENST00000489215	MRPL12	P52815	198 aa	Known RBP	27.97	■■■□□ 2.07
PTPN18-213	ENST00000489215	RNF207	Q6ZRF8	634 aa		27.97	■■■□□ 2.07
PTPN18-213	ENST00000489215	IGDCC4	Q8TDY8	1250 aa		27.97	■■■□□ 2.07
PTPN18-213	ENST00000489215	FGD4	Q96M96	766 aa		27.97	■■■□□ 2.07
PTPN18-213	ENST00000489215	SENP6	Q9GZR1	1112 aa	Predicted RBP	27.97	■■■□□ 2.07
PTPN18-213	ENST00000489215	PTPDC1	A2A3K4	754 aa		27.96	■■■□□ 2.07
PTPN18-213	ENST00000489215	PALM3	A6NDB9	673 aa	Predicted RBP	27.96	■■■□□ 2.07
PTPN18-213	ENST00000489215	SOWAHB	A6NEL2	793 aa		27.96	■■■□□ 2.07
PTPN18-213	ENST00000489215	TAL1	P17542	331 aa	Predicted RBP	27.96	■■■□□ 2.07
PTPN18-213	ENST00000489215	BAAT	Q14032	418 aa	Predicted RBP	27.96	■■■□□ 2.07
PTPN18-213	ENST00000489215	MAP3K14	Q99558	947 aa		27.96	■■■□□ 2.07
PTPN18-213	ENST00000489215	TAF6L	Q9Y6J9	622 aa		27.96	■■■□□ 2.07
PTPN18-213	ENST00000489215	MYH6	P13533	1939 aa		27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	DUSP11	O75319	330 aa	Known RBP	27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	GJC2	Q5T442	439 aa	Predicted RBP	27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	ANO1	Q5XXA6	986 aa		27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	CHST3	Q7LGC8	479 aa		27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	FBXO11	Q86XK2	927 aa		27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	MCF2L2	Q86YR7	1114 aa		27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	CLEC4D	Q8WXI8	215 aa		27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	SPC25	Q9HBM1	224 aa		27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	MAD2L2	Q9UI95	211 aa		27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	MRPL11	Q9Y3B7	192 aa	Known RBP	27.95	■■■□□ 2.06
PTPN18-213	ENST00000489215	NFIB	O00712	420 aa		27.94	■■■□□ 2.06
PTPN18-213	ENST00000489215	GRM4	Q14833	912 aa		27.94	■■■□□ 2.06
PTPN18-213	ENST00000489215	LRRC41	Q15345	812 aa		27.94	■■■□□ 2.06
PTPN18-213	ENST00000489215	JMJD4	Q9H9V9	463 aa		27.94	■■■□□ 2.06
PTPN18-213	ENST00000489215	VAT1L	Q9HCJ6	419 aa		27.94	■■■□□ 2.06
PTPN18-213	ENST00000489215	MCM3AP	O60318	1980 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	PRC1	O43663	620 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	MYCN	P04198	464 aa	Predicted RBP	27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	ANTXR2	P58335	489 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	TROAP	Q12815	778 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	KRT32	Q14532	448 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	CCDC144B	Q3MJ40	725 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	USH1G	Q495M9	461 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	STAG2	Q8N3U4	1231 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	DNER	Q8NFT8	737 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	TSEN34	Q9BSV6	310 aa	Known RBP	27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	AMN	Q9BXJ7	453 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	CPVL	Q9H3G5	476 aa		27.93	■■■□□ 2.06
PTPN18-213	ENST00000489215	KIF5B	P33176	963 aa		27.92	■■■□□ 2.06
PTPN18-213	ENST00000489215	LIFR	P42702	1097 aa		27.92	■■■□□ 2.06
PTPN18-213	ENST00000489215	QRICH1	Q2TAL8	776 aa		27.92	■■■□□ 2.06
PTPN18-213	ENST00000489215	TSGA10IP	Q3SY00	556 aa		27.92	■■■□□ 2.06
PTPN18-213	ENST00000489215	MORC4	Q8TE76	937 aa		27.92	■■■□□ 2.06
PTPN18-213	ENST00000489215	ZBTB5	O15062	677 aa		27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	DDAH1	O94760	285 aa		27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	CALM1	P0DP23	149 aa		27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	CALM2	P0DP24	149 aa		27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	CALM3	P0DP25	149 aa		27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	CALML3	P27482	149 aa		27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	RPS6	P62753	249 aa	Known RBP	27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	SAMD3	Q8N6K7	520 aa		27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	CTCFL	Q8NI51	663 aa	Predicted RBP	27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	MTMR8	Q96EF0	704 aa		27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	VTA1	Q9NP79	307 aa		27.91	■■■□□ 2.06
PTPN18-213	ENST00000489215	ALPK3	Q96L96	1907 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	CCDC69	A6NI79	296 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	GNAQ	P50148	359 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	ALDH5A1	P51649	535 aa	Predicted RBP	27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	IQSEC1	Q6DN90	963 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	NFXL1	Q6ZNB6	911 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	C7orf61	Q8IZ16	206 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	LZTS2	Q9BRK4	669 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	KATNBL1	Q9H079	304 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	RIOX1	Q9H6W3	641 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	LY9	Q9HBG7	655 aa		27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	MAP3K20	Q9NYL2	800 aa	Known RBP	27.9	■■■□□ 2.06
PTPN18-213	ENST00000489215	REC8	O95072	547 aa		27.89	■■■□□ 2.06
PTPN18-213	ENST00000489215	PGK1	P00558	417 aa		27.89	■■■□□ 2.06
PTPN18-213	ENST00000489215	HMGB1	P09429	215 aa	Known RBP	27.89	■■■□□ 2.06
PTPN18-213	ENST00000489215	SMARCA1	P28370	1054 aa		27.89	■■■□□ 2.06
PTPN18-213	ENST00000489215	ZNF654	Q8IZM8	581 aa		27.89	■■■□□ 2.06
PTPN18-213	ENST00000489215	PCSK9	Q8NBP7	692 aa	Known RBP	27.89	■■■□□ 2.06
PTPN18-213	ENST00000489215	NEK1	Q96PY6	1258 aa		27.89	■■■□□ 2.06
PTPN18-213	ENST00000489215	PHF24	Q9UPV7	400 aa		27.89	■■■□□ 2.06
PTPN18-213	ENST00000489215	MOXD2P	A6NHM9	499 aa		27.88	■■■□□ 2.05
PTPN18-213	ENST00000489215	ADAMTS4	O75173	837 aa		27.88	■■■□□ 2.05
PTPN18-213	ENST00000489215	TNFAIP2	Q03169	654 aa		27.88	■■■□□ 2.05
PTPN18-213	ENST00000489215	NUP133	Q8WUM0	1156 aa		27.88	■■■□□ 2.05
PTPN18-213	ENST00000489215		Q9Y3F1	56 aa		27.88	■■■□□ 2.05
PTPN18-213	ENST00000489215	SYNRG	Q9UMZ2	1314 aa		27.88	■■■□□ 2.05
PTPN18-213	ENST00000489215	SH2B2	O14492	632 aa	Predicted RBP	27.87	■■■□□ 2.05
PTPN18-213	ENST00000489215	EPB41L2	O43491	1005 aa	Known RBP	27.87	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms