RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 FANCBQ8NB91 859 aa21.69■■□□□ 1.06
PTCD3-217ENST00000488801 BRF1Q92994 677 aa21.69■■□□□ 1.06
PTCD3-217ENST00000488801 MAML3Q96JK9 1138 aa21.69■■□□□ 1.06
PTCD3-217ENST00000488801 CYP46A1Q9Y6A2 500 aa21.69■■□□□ 1.06
PTCD3-217ENST00000488801 ALPK3Q96L96 1907 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 KLF18A0A0U1RQI7 1052 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 ZBTB5O15062 677 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 PGK2P07205 417 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 MTFR1Q15390 333 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 DPP9Q86TI2 863 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 SRBD1Q8N5C6 995 aaKnown RBP21.68■■□□□ 1.06
PTCD3-217ENST00000488801 FAM133AQ8N9E0 248 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 LZTS2Q9BRK4 669 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 UPF3BQ9BZI7 483 aaKnown RBP21.68■■□□□ 1.06
PTCD3-217ENST00000488801 MAF1Q9H063 256 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 FAM217BQ9NTX9 383 aaPredicted RBP21.68■■□□□ 1.06
PTCD3-217ENST00000488801 PFASO15067 1338 aa21.68■■□□□ 1.06
PTCD3-217ENST00000488801 ASTN1O14525 1302 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 ABCB11O95342 1321 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 CNTNAP5Q8WYK1 1306 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 NFIBO00712 420 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 ZBTB43O43298 467 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 GNAQP50148 359 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 GHRHRQ02643 423 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 APOBRQ0VD83 1088 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 FUT2Q10981 343 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 RAB11FIP4Q86YS3 637 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 PIGSQ96S52 555 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 ALDH8A1Q9H2A2 487 aaPredicted RBP21.67■■□□□ 1.06
PTCD3-217ENST00000488801 PAK6Q9NQU5 681 aaPredicted RBP21.67■■□□□ 1.06
PTCD3-217ENST00000488801 SLC5A4Q9NY91 659 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 CYP39A1Q9NYL5 469 aa21.67■■□□□ 1.06
PTCD3-217ENST00000488801 OPLAHO14841 1288 aa21.66■■□□□ 1.06
PTCD3-217ENST00000488801 UBXN2AP68543 259 aa21.66■■□□□ 1.06
PTCD3-217ENST00000488801 ZNF467Q7Z7K2 595 aaPredicted RBP21.66■■□□□ 1.06
PTCD3-217ENST00000488801 RBM28Q9NW13 759 aaKnown RBP21.66■■□□□ 1.06
PTCD3-217ENST00000488801 DHX16O60231 1041 aaKnown RBP21.65■■□□□ 1.06
PTCD3-217ENST00000488801 SLC4A3P48751 1232 aa21.65■■□□□ 1.06
PTCD3-217ENST00000488801 CACNB2Q08289 660 aaPredicted RBP21.65■■□□□ 1.06
PTCD3-217ENST00000488801 MAMDC4Q6UXC1 1216 aa21.65■■□□□ 1.06
PTCD3-217ENST00000488801 FBXO11Q86XK2 927 aa21.65■■□□□ 1.06
PTCD3-217ENST00000488801 CCDC144CPQ8IYA2 1237 aa21.65■■□□□ 1.06
PTCD3-217ENST00000488801 ANKRD35Q8N283 1001 aa21.65■■□□□ 1.06
PTCD3-217ENST00000488801 MSL3Q8N5Y2 521 aaKnown RBP21.65■■□□□ 1.06
PTCD3-217ENST00000488801 RGS22Q8NE09 1264 aa21.65■■□□□ 1.06
PTCD3-217ENST00000488801 AMNQ9BXJ7 453 aa21.65■■□□□ 1.06
PTCD3-217ENST00000488801 UNC93B1Q9H1C4 597 aa21.65■■□□□ 1.06
PTCD3-217ENST00000488801 VAT1LQ9HCJ6 419 aa21.65■■□□□ 1.06
PTCD3-217ENST00000488801 PNMA6FA0A0J9YX94 578 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 GOLGA8AA7E2F4 631 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 GOLGA8BA8MQT2 603 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 CYBAP13498 195 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 CCL5P13501 91 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 PRKAR2AP13861 404 aaKnown RBP21.64■■□□□ 1.05
PTCD3-217ENST00000488801 CDC27P30260 824 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 RBM25P49756 843 aaKnown RBP21.64■■□□□ 1.05
PTCD3-217ENST00000488801 PPP2R5BQ15173 497 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 RTN1Q16799 776 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 USH1GQ495M9 461 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 SYNE3Q6ZMZ3 975 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 KIF2CQ99661 725 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 MYH7BA7E2Y1 1941 aa21.64■■□□□ 1.05
PTCD3-217ENST00000488801 RPTORQ8N122 1335 aa21.63■■□□□ 1.05
PTCD3-217ENST00000488801 SYNGAP1Q96PV0 1343 aa21.63■■□□□ 1.05
PTCD3-217ENST00000488801 CCDC85CA6NKD9 419 aa21.63■■□□□ 1.05
PTCD3-217ENST00000488801 FGD1P98174 961 aa21.63■■□□□ 1.05
PTCD3-217ENST00000488801 SLC30A10Q6XR72 485 aa21.63■■□□□ 1.05
PTCD3-217ENST00000488801 HOMER1Q86YM7 354 aa21.63■■□□□ 1.05
PTCD3-217ENST00000488801 CMTR1Q8N1G2 835 aaKnown RBP21.63■■□□□ 1.05
PTCD3-217ENST00000488801 DDX11Q96FC9 970 aa21.63■■□□□ 1.05
PTCD3-217ENST00000488801 TINF2Q9BSI4 451 aa21.63■■□□□ 1.05
PTCD3-217ENST00000488801 PDE4DIPQ5VU43 2346 aa21.63■■□□□ 1.05
PTCD3-217ENST00000488801 SOWAHBA6NEL2 793 aa21.62■■□□□ 1.05
PTCD3-217ENST00000488801 CYP2C19P33261 490 aa21.62■■□□□ 1.05
PTCD3-217ENST00000488801 CNTN2Q02246 1040 aa21.62■■□□□ 1.05
PTCD3-217ENST00000488801 MFSD14CQ5VZR4 134 aa21.62■■□□□ 1.05
PTCD3-217ENST00000488801 TRPV1Q8NER1 839 aa21.62■■□□□ 1.05
PTCD3-217ENST00000488801 MORC4Q8TE76 937 aa21.62■■□□□ 1.05
PTCD3-217ENST00000488801 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.62■■□□□ 1.05
PTCD3-217ENST00000488801 PDRG1Q9NUG6 133 aa21.62■■□□□ 1.05
PTCD3-217ENST00000488801 NRBP1Q9UHY1 535 aa21.62■■□□□ 1.05
PTCD3-217ENST00000488801 DOCK5Q9H7D0 1870 aa21.61■■□□□ 1.05
PTCD3-217ENST00000488801 POTEFA5A3E0 1075 aa21.61■■□□□ 1.05
PTCD3-217ENST00000488801 POTEB2H3BUK9 544 aa21.61■■□□□ 1.05
PTCD3-217ENST00000488801 GJB1P08034 283 aa21.61■■□□□ 1.05
PTCD3-217ENST00000488801 PDIA3P30101 505 aaKnown RBP21.61■■□□□ 1.05
PTCD3-217ENST00000488801 METAP2P50579 478 aaKnown RBP eCLIP21.61■■□□□ 1.05
PTCD3-217ENST00000488801 RPS6P62753 249 aaKnown RBP21.61■■□□□ 1.05
PTCD3-217ENST00000488801 NTRK3Q16288 839 aa21.61■■□□□ 1.05
PTCD3-217ENST00000488801 NSMFQ6X4W1 530 aa21.61■■□□□ 1.05
PTCD3-217ENST00000488801 SHISA4Q96DD7 197 aa21.61■■□□□ 1.05
PTCD3-217ENST00000488801 ZNF274Q96GC6 653 aaPredicted RBP21.61■■□□□ 1.05
PTCD3-217ENST00000488801 BIN2Q9UBW5 565 aaPredicted RBP21.61■■□□□ 1.05
PTCD3-217ENST00000488801 MRPL11Q9Y3B7 192 aaKnown RBP21.61■■□□□ 1.05
PTCD3-217ENST00000488801 MKI67P46013 3256 aaKnown RBP21.61■■□□□ 1.05
PTCD3-217ENST00000488801 LOC102724159A0A0B4J2E5 919 aa21.6■■□□□ 1.05
PTCD3-217ENST00000488801 CCND3P30281 292 aaPredicted RBP21.6■■□□□ 1.05
PTCD3-217ENST00000488801 BAATQ14032 418 aaPredicted RBP21.6■■□□□ 1.05
PTCD3-217ENST00000488801 PWP2Q15269 919 aaKnown RBP21.6■■□□□ 1.05
PTCD3-217ENST00000488801 RNF207Q6ZRF8 634 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms