RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 RXRAP19793 462 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 CCND3P30281 292 aaPredicted RBP18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 GJA8P48165 433 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 RAB11FIP4Q86YS3 637 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 FAM133AQ8N9E0 248 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 TRPV1Q8NER1 839 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 U2AF1L4Q8WU68 220 aaKnown RBP18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 CLEC4DQ8WXI8 215 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 DEFB118Q96PH6 123 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 VAT1LQ9HCJ6 419 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 PFASO15067 1338 aa18.63■□□□□ 0.57
ERGIC3-216ENST00000488384 ALPK3Q96L96 1907 aa18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 USH1GQ495M9 461 aa18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 APOA5Q6Q788 366 aa18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 BLOC1S2Q6QNY1 142 aa18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 CTCFLQ8NI51 663 aaPredicted RBP18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 TINF2Q9BSI4 451 aa18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 RIOX1Q9H6W3 641 aa18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 CYP39A1Q9NYL5 469 aa18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 SLC12A7Q9Y666 1083 aa18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 LRRC37A2A6NM11 1700 aa18.62■□□□□ 0.57
ERGIC3-216ENST00000488384 ASTN1O14525 1302 aa18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 POTEB2H3BUK9 544 aa18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 PPP1R11O60927 126 aaPredicted RBP18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 CASTP20810 708 aaKnown RBP18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 RPS6KB1P23443 525 aa18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 KIF5BP33176 963 aa18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 CNTN2Q02246 1040 aa18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 NSMFQ6X4W1 530 aa18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 ZNF467Q7Z7K2 595 aaPredicted RBP18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 MICU3Q86XE3 530 aa18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 CRISPLD2Q9H0B8 497 aa18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 BRPF3Q9ULD4 1205 aa18.61■□□□□ 0.57
ERGIC3-216ENST00000488384 ABCB11O95342 1321 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 BAZ2BQ9UIF8 2168 aaKnown RBP18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 ZBTB5O15062 677 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 PLEKHA8P1O95397 391 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 SGPL1O95470 568 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 CALM1P0DP23 149 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 CALM2P0DP24 149 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 CALM3P0DP25 149 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 PSMA5P28066 241 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 SLC30A10Q6XR72 485 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 HOMER1Q86YM7 354 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 CCDC144CPQ8IYA2 1237 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 PIGSQ96S52 555 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 SPZ1Q9BXG8 430 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 MCM3APO60318 1980 aa18.6■□□□□ 0.57
ERGIC3-216ENST00000488384 SYNGAP1Q96PV0 1343 aa18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 SOWAHBA6NEL2 793 aa18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 BAATQ14032 418 aaPredicted RBP18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 C8orf34Q49A92 452 aa18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 MAMDC4Q6UXC1 1216 aa18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 Q6ZUG5 572 aa18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 UBE2Q1Q7Z7E8 422 aa18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 FBXO11Q86XK2 927 aa18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 MSL3Q8N5Y2 521 aaKnown RBP18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 PURBQ96QR8 312 aaKnown RBP18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 AMNQ9BXJ7 453 aa18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 ZSWIM6Q9HCJ5 1215 aa18.59■□□□□ 0.57
ERGIC3-216ENST00000488384 KLF18A0A0U1RQI7 1052 aa18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 SEC24BO95487 1268 aa18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 PRAMEF19Q5SWL8 479 aa18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 TMTC3Q6ZXV5 915 aa18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 CMTR1Q8N1G2 835 aaKnown RBP18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 SRBD1Q8N5C6 995 aaKnown RBP18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 FANCBQ8NB91 859 aa18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 LZTS2Q9BRK4 669 aa18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 AGXT2Q9BYV1 514 aa18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 TM6SF1Q9BZW5 370 aa18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 NRBP1Q9UHY1 535 aa18.58■□□□□ 0.56
ERGIC3-216ENST00000488384 PTPDC1A2A3K4 754 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 ZBTB43O43298 467 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 SNAI1O95863 264 aaPredicted RBP18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 SMARCA1P28370 1054 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 GNAQP50148 359 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 RCAN1P53805 252 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 RPS6P62753 249 aaKnown RBP18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 FGD1P98174 961 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 LHX8Q68G74 356 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 SYNE3Q6ZMZ3 975 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 RNF207Q6ZRF8 634 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 RUFY3Q7L099 469 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 ARMCX2Q7L311 632 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 FBXL16Q8N461 479 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 BRF1Q92994 677 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 DDX20Q9UHI6 824 aaKnown RBP18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 OGDHLQ9ULD0 1010 aa18.57■□□□□ 0.56
ERGIC3-216ENST00000488384 PNMA6FA0A0J9YX94 578 aa18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 OPLAHO14841 1288 aa18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 SEPT4O43236 478 aa18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 ZNF865P0CJ78 1059 aaPredicted RBP18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 CALML3P27482 149 aa18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 CNGA1P29973 690 aa18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 RTN1Q16799 776 aa18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 RGS22Q8NE09 1264 aa18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 PIBF1Q8WXW3 757 aa18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 UPF3BQ9BZI7 483 aaKnown RBP18.56■□□□□ 0.56
ERGIC3-216ENST00000488384 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms