RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 CUL5Q93034 780 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 GMLQ99445 158 aa18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 SAMSN1Q9NSI8 373 aaKnown RBP18.06■□□□□ 0.48
RAPGEF3-211ENST00000488250 FAM196BA6NMK8 535 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 USP17L10C9JJH3 530 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 EDIL3O43854 480 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 VIL1P09327 827 aaKnown RBP18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 FXR2P51116 673 aaKnown RBP eCLIP18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 TBX2Q13207 712 aaPredicted RBP18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 ABCB5Q2M3G0 1257 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 SLFN13Q68D06 897 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 PPP4R3AQ6IN85 833 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 CABP7Q86V35 215 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 MYRIPQ8NFW9 859 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 GMCL1Q96IK5 515 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 RWDD2AQ9UIY3 292 aa18.05■□□□□ 0.48
RAPGEF3-211ENST00000488250 A0A1B0GTH6 734 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 TMEM232C9JQI7 657 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 KCNA3P22001 575 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 SLC16A2P36021 539 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 SLC1A4P43007 532 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 ICA1Q05084 483 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 NR1I3Q14994 352 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 SEPT2Q15019 361 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 APTXQ7Z2E3 356 aaKnown RBP18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 PDGFDQ9GZP0 370 aaPredicted RBP18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 TMX1Q9H3N1 280 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 HERC5Q9UII4 1024 aaKnown RBP18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 UQCRHLA0A096LP55 91 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 SPDYE2BA6NHP3 402 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 UQCRHP07919 91 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 SPDYE6P0CI01 402 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 SMYD4Q8IYR2 804 aaPredicted RBP18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 CCAR2Q8N163 923 aaKnown RBP18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 RASSF8Q8NHQ8 419 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 CTAGE1Q96RT6 745 aa18.04■□□□□ 0.48
RAPGEF3-211ENST00000488250 GTF2F1P35269 517 aaKnown RBP eCLIP18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 PDIA5Q14554 519 aa18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 TPD52L1Q16890 204 aaPredicted RBP18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 SHROOM1Q2M3G4 852 aaPredicted RBP18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 KLHL10Q6JEL2 608 aa18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 NAP1L4Q99733 375 aaKnown RBP18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 GTPBP4Q9BZE4 634 aaKnown RBP18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 ATF5Q9Y2D1 282 aaPredicted RBP18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 KIF13BQ9NQT8 1826 aa18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 ARFGEF1Q9Y6D6 1849 aa18.03■□□□□ 0.48
RAPGEF3-211ENST00000488250 PSDA5PKW4 1024 aaPredicted RBP18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 KLRC4O43908 158 aa18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 PLCG1P19174 1290 aa18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 CALCRLQ16602 461 aa18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 SPECC1LQ69YQ0 1117 aa18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 NYAP1Q6ZVC0 841 aa18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 MMTAG2Q9BU76 263 aaKnown RBP18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 PSTPIP2Q9H939 334 aa18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 TMOD2Q9NZR1 351 aa18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 HDAC9Q9UKV0 1011 aa18.02■□□□□ 0.48
RAPGEF3-211ENST00000488250 F5H6K3 240 aa18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 RHOBTB3O94955 611 aa18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 GCFC2P16383 781 aaKnown RBP18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 TECP42680 631 aa18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 KLRC3Q07444 240 aa18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 PAK1Q13153 545 aa18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 QRICH1Q2TAL8 776 aa18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 RBM26Q5T8P6 1007 aaKnown RBP18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 LRRC15Q8TF66 581 aa18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 C7orf25Q9BPX7 421 aa18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 CTNND2Q9UQB3 1225 aa18.02■□□□□ 0.47
RAPGEF3-211ENST00000488250 LRRC10BA6NIK2 292 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 DYNC1I1O14576 645 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 SLC37A4O43826 429 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 DPEP1P16444 411 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 STX17P56962 302 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 TMEM266Q2M3C6 531 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 FKBP1CQ5VVH2 108 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 ADSSL1Q8N142 457 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 LARGE2Q8N3Y3 721 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 FAM151AQ8WW52 585 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 C16orf45Q96MC5 204 aaPredicted RBP18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 CSRNP1Q96S65 589 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 RAB34Q9BZG1 259 aa18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 ADD3Q9UEY8 706 aaKnown RBP18.01■□□□□ 0.47
RAPGEF3-211ENST00000488250 COL4A5P29400 1685 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 PSMD14O00487 310 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 GDF11O95390 407 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 TDP2O95551 362 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 TNNT1P13805 278 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 TNNI2P48788 182 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 SPAG1Q07617 926 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 CDC37Q16543 378 aaPredicted RBP18■□□□□ 0.47
RAPGEF3-211ENST00000488250 HSP90AA4PQ58FG1 418 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 MCTP2Q6DN12 878 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 BTNL9Q6UXG8 535 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 MTMR14Q8NCE2 650 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 GIMAP8Q8ND71 665 aaPredicted RBP18■□□□□ 0.47
RAPGEF3-211ENST00000488250 CALML4Q96GE6 196 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 LIMA1Q9UHB6 759 aaKnown RBP18■□□□□ 0.47
RAPGEF3-211ENST00000488250 USP27XA6NNY8 438 aa18■□□□□ 0.47
RAPGEF3-211ENST00000488250 NDUFB10O96000 172 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms