RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 CEP135Q66GS9 1140 aa16.74■□□□□ 0.27
EPHA1-205ENST00000488068 PSMD1Q99460 953 aa16.74■□□□□ 0.27
EPHA1-205ENST00000488068 BIN2Q9UBW5 565 aaPredicted RBP16.74■□□□□ 0.27
EPHA1-205ENST00000488068 ZBTB5O15062 677 aa16.74■□□□□ 0.27
EPHA1-205ENST00000488068 CASP1P29466 404 aa16.74■□□□□ 0.27
EPHA1-205ENST00000488068 CACNB3P54284 484 aa16.74■□□□□ 0.27
EPHA1-205ENST00000488068 CCDC96Q2M329 555 aa16.74■□□□□ 0.27
EPHA1-205ENST00000488068 CCDC93Q567U6 631 aa16.74■□□□□ 0.27
EPHA1-205ENST00000488068 TMEM179Q6ZVK1 233 aa16.74■□□□□ 0.27
EPHA1-205ENST00000488068 COA7Q96BR5 231 aa16.74■□□□□ 0.27
EPHA1-205ENST00000488068 YDJCA8MPS7 323 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 CD44P16070 742 aaKnown RBP16.73■□□□□ 0.27
EPHA1-205ENST00000488068 NAALADL2Q58DX5 795 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 ZNF658Q5TYW1 1059 aaPredicted RBP16.73■□□□□ 0.27
EPHA1-205ENST00000488068 JAKMIP3Q5VZ66 844 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 ZSCAN29Q8IWY8 852 aaPredicted RBP16.73■□□□□ 0.27
EPHA1-205ENST00000488068 TRMT44Q8IYL2 757 aaKnown RBP16.73■□□□□ 0.27
EPHA1-205ENST00000488068 TTLL6Q8N841 843 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 GLT8D2Q9H1C3 349 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 C21orf2O43822 256 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 RPN1P04843 607 aaKnown RBP16.73■□□□□ 0.27
EPHA1-205ENST00000488068 EEF2P13639 858 aaKnown RBP16.73■□□□□ 0.27
EPHA1-205ENST00000488068 CLK2P49760 499 aaKnown RBP16.73■□□□□ 0.27
EPHA1-205ENST00000488068 ATP2B2Q01814 1243 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 KCNB1Q14721 858 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 BLZF1Q9H2G9 400 aa16.73■□□□□ 0.27
EPHA1-205ENST00000488068 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 RASSF8Q8NHQ8 419 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 ZNF592Q92610 1267 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 STAMQ92783 540 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 CUL5Q93034 780 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 INTS13Q9NVM9 706 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 KBTBD4Q9NVX7 518 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 SYNPO2Q9UMS6 1093 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 USP27XA6NNY8 438 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 CDC25AP30304 524 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 MRPL12P52815 198 aaKnown RBP16.72■□□□□ 0.27
EPHA1-205ENST00000488068 CDKAL1Q5VV42 579 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 CABP7Q86V35 215 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 GMCL1P1Q8NEA9 526 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 ZNF397Q8NF99 534 aaPredicted RBP16.72■□□□□ 0.27
EPHA1-205ENST00000488068 CTAGE1Q96RT6 745 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 TDRD3Q9H7E2 651 aaKnown RBP16.72■□□□□ 0.27
EPHA1-205ENST00000488068 SAMSN1Q9NSI8 373 aaKnown RBP16.72■□□□□ 0.27
EPHA1-205ENST00000488068 TMEM260Q9NX78 707 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 RWDD2AQ9UIY3 292 aa16.72■□□□□ 0.27
EPHA1-205ENST00000488068 PPP1R11O60927 126 aaPredicted RBP16.71■□□□□ 0.27
EPHA1-205ENST00000488068 KMT5BQ4FZB7 885 aa16.71■□□□□ 0.27
EPHA1-205ENST00000488068 KCTD1Q719H9 257 aa16.71■□□□□ 0.27
EPHA1-205ENST00000488068 IGSF22Q8N9C0 903 aa16.71■□□□□ 0.27
EPHA1-205ENST00000488068 MTMR9Q96QG7 549 aa16.71■□□□□ 0.27
EPHA1-205ENST00000488068 A0A1B0GTH6 734 aa16.71■□□□□ 0.27
EPHA1-205ENST00000488068 PP2D1A8MPX8 630 aa16.71■□□□□ 0.27
EPHA1-205ENST00000488068 TBX2Q13207 712 aaPredicted RBP16.71■□□□□ 0.27
EPHA1-205ENST00000488068 RSBN1LQ6PCB5 846 aaPredicted RBP16.71■□□□□ 0.27
EPHA1-205ENST00000488068 NYAP1Q6ZVC0 841 aa16.71■□□□□ 0.27
EPHA1-205ENST00000488068 SLC16A10Q8TF71 515 aa16.71■□□□□ 0.27
EPHA1-205ENST00000488068 ZNF215Q9UL58 517 aaPredicted RBP16.71■□□□□ 0.27
EPHA1-205ENST00000488068 MYH7BA7E2Y1 1941 aa16.71■□□□□ 0.27
EPHA1-205ENST00000488068 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 SLC1A4P43007 532 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 BAG6P46379 1132 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 FXR2P51116 673 aaKnown RBP eCLIP16.7■□□□□ 0.26
EPHA1-205ENST00000488068 ICA1Q05084 483 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 NR1I3Q14994 352 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 TERF2Q15554 542 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 ABCB5Q2M3G0 1257 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 SLFN13Q68D06 897 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 PPP4R3AQ6IN85 833 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 CCAR2Q8N163 923 aaKnown RBP16.7■□□□□ 0.26
EPHA1-205ENST00000488068 KRT222Q8N1A0 295 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 NAP1L4Q99733 375 aaKnown RBP16.7■□□□□ 0.26
EPHA1-205ENST00000488068 TMEM232C9JQI7 657 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 KLHL10Q6JEL2 608 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 PRMT6Q96LA8 375 aaPredicted RBP16.7■□□□□ 0.26
EPHA1-205ENST00000488068 TMOD2Q9NZR1 351 aa16.7■□□□□ 0.26
EPHA1-205ENST00000488068 PSDA5PKW4 1024 aaPredicted RBP16.69■□□□□ 0.26
EPHA1-205ENST00000488068 FAM196BA6NMK8 535 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 VIL1P09327 827 aaKnown RBP16.69■□□□□ 0.26
EPHA1-205ENST00000488068 SEPT2Q15019 361 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 CALCRLQ16602 461 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 SPECC1LQ69YQ0 1117 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 GMCL1Q96IK5 515 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 TMX1Q9H3N1 280 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 HERC5Q9UII4 1024 aaKnown RBP16.69■□□□□ 0.26
EPHA1-205ENST00000488068 SLC16A2P36021 539 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 PAK1Q13153 545 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 TMEM266Q2M3C6 531 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 SMYD4Q8IYR2 804 aaPredicted RBP16.69■□□□□ 0.26
EPHA1-205ENST00000488068 RAB34Q9BZG1 259 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 HDAC9Q9UKV0 1011 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 CTNND2Q9UQB3 1225 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 SLURP2P0DP57 97 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 GCFC2P16383 781 aaKnown RBP16.69■□□□□ 0.26
EPHA1-205ENST00000488068 SF3B2Q13435 895 aaKnown RBP16.69■□□□□ 0.26
EPHA1-205ENST00000488068 PDIA5Q14554 519 aa16.69■□□□□ 0.26
EPHA1-205ENST00000488068 APTXQ7Z2E3 356 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms