RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 DAXXQ9UER7 740 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-227ENST00000486806 MTMR6Q9Y217 621 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 RIPK3Q9Y572 518 aa11.03□□□□□ -0.64
MCF2L-227ENST00000486806 M0R2N6 131 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 CA12O43570 354 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 STX6O43752 255 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 TLR2O60603 784 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 XBP1P17861 261 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 STAT3P40763 770 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 FOSBP53539 338 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 CRHR2Q13324 411 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 PKP1Q13835 747 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 TKFCQ3LXA3 575 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 LARP1BQ659C4 914 aaKnown RBP11.02□□□□□ -0.65
MCF2L-227ENST00000486806 C17orf99Q6UX52 265 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 RIOX2Q8IUF8 465 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 TEX2Q8IWB9 1127 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 CPXCR1Q8N123 301 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 ANKRD13CQ8N6S4 541 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 PAGR1Q9BTK6 254 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 MOV10L1Q9BXT6 1211 aaKnown RBP11.02□□□□□ -0.65
MCF2L-227ENST00000486806 CIZ1Q9ULV3 898 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-227ENST00000486806 KCNJ14Q9UNX9 436 aa11.02□□□□□ -0.65
MCF2L-227ENST00000486806 CTDP1Q9Y5B0 961 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-227ENST00000486806 COL11A1P12107 1806 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-227ENST00000486806 NFIBO00712 420 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 ADAMTS3O15072 1205 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 ALAS1P13196 640 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 PDIA4P13667 645 aaKnown RBP11.01□□□□□ -0.65
MCF2L-227ENST00000486806 COPB2P35606 906 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 CLK2P49760 499 aaKnown RBP11.01□□□□□ -0.65
MCF2L-227ENST00000486806 GUCY1B3Q02153 619 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 TRIM29Q14134 588 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 Q3C1V9 767 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 MUM1L1Q5H9M0 696 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 GALNT17Q6IS24 598 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 SHCBP1Q8NEM2 672 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 GPRC5AQ8NFJ5 357 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 TNFRSF25Q93038 417 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 ZFYVE28Q9HCC9 887 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 RIC8AQ9NPQ8 531 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 RNF146Q9NTX7 359 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 PCDHA4Q9UN74 947 aa11.01□□□□□ -0.65
MCF2L-227ENST00000486806 MRPL11Q9Y3B7 192 aaKnown RBP11.01□□□□□ -0.65
MCF2L-227ENST00000486806 SMCO2A6NFE2 343 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 H3BQV1 296 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 PIK3CDO00329 1044 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 MEIS2O14770 477 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 BRD1O95696 1058 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 SLC25A27O95847 323 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 ERCC3P19447 782 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 CALML3P27482 149 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 GNA11P29992 359 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 HSD17B4P51659 736 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 ADCY7P51828 1080 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 NLRP5P59047 1200 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 PLS1Q14651 629 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 IFFO2Q5TF58 517 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 DIS3L2Q8IYB7 885 aaKnown RBP11□□□□□ -0.65
MCF2L-227ENST00000486806 CHST13Q8NET6 341 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 OXER1Q8TDS5 423 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 CUL5Q93034 780 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 TRERF1Q96PN7 1200 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 MAF1Q9H063 256 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 GLT8D2Q9H1C3 349 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 PORCNQ9H237 461 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 R3HDMLQ9H3Y0 253 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 ACAD9Q9H845 621 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 PSTPIP2Q9H939 334 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 C6orf50Q9HD87 102 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 HOMER2Q9NSB8 354 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 CPA4Q9UI42 421 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 ZDHHC9Q9Y397 364 aa11□□□□□ -0.65
MCF2L-227ENST00000486806 BAZ2BQ9UIF8 2168 aaKnown RBP10.99□□□□□ -0.65
MCF2L-227ENST00000486806 RBBP6Q7Z6E9 1792 aaKnown RBP10.99□□□□□ -0.65
MCF2L-227ENST00000486806 VPS37CA5D8V6 355 aaPredicted RBP10.99□□□□□ -0.65
MCF2L-227ENST00000486806 KIF28PB7ZC32 967 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 ZSCAN22P10073 491 aaPredicted RBP10.99□□□□□ -0.65
MCF2L-227ENST00000486806 U2AF2P26368 475 aaKnown RBP eCLIP10.99□□□□□ -0.65
MCF2L-227ENST00000486806 KRT2P35908 639 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 CCNA1P78396 465 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 RESTQ13127 1097 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 BLIDQ8IZY5 108 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 REXO1Q8N1G1 1221 aaKnown RBP10.99□□□□□ -0.65
MCF2L-227ENST00000486806 SAMD3Q8N6K7 520 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 BICD2Q8TD16 824 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 FOXP1Q9H334 677 aaPredicted RBP10.99□□□□□ -0.65
MCF2L-227ENST00000486806 MROH8Q9H579 483 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 A1CFQ9NQ94 594 aaKnown RBP10.99□□□□□ -0.65
MCF2L-227ENST00000486806 RNF186Q9NXI6 227 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 SAGE1Q9NXZ1 904 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 FBXO40Q9UH90 709 aa10.99□□□□□ -0.65
MCF2L-227ENST00000486806 MYH6P13533 1939 aa10.98□□□□□ -0.65
MCF2L-227ENST00000486806 BTBD18B2RXH4 712 aa10.98□□□□□ -0.65
MCF2L-227ENST00000486806 MRPL12P52815 198 aaKnown RBP10.98□□□□□ -0.65
MCF2L-227ENST00000486806 NUCB2P80303 420 aa10.98□□□□□ -0.65
MCF2L-227ENST00000486806 NR5A1Q13285 461 aa10.98□□□□□ -0.65
MCF2L-227ENST00000486806 AP3B2Q13367 1082 aa10.98□□□□□ -0.65
MCF2L-227ENST00000486806 SAFBQ15424 915 aaKnown RBP eCLIP10.98□□□□□ -0.65
MCF2L-227ENST00000486806 UBE2SQ16763 222 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms