RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 MRPL11Q9Y3B7 192 aaKnown RBP20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 SMCO2A6NFE2 343 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 F13A1P00488 732 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 CYP2C8P10632 490 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 TAL1P17542 331 aaPredicted RBP20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 KRT2P35908 639 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 KIF23Q02241 960 aaPredicted RBP20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 NPY5RQ15761 445 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 MCTP1Q6DN14 999 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 IFNL1Q8IU54 200 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 DIS3L2Q8IYB7 885 aaKnown RBP20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 PCDHA4Q9UN74 947 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 ZDHHC9Q9Y397 364 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 RABGAP1Q9Y3P9 1069 aa20.37■□□□□ 0.85
SMARCD3-212ENST00000485610 MYH7BA7E2Y1 1941 aa20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 GCLCP48506 637 aaPredicted RBP20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 GNL2Q13823 731 aaKnown RBP20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 SNRNP48Q6IEG0 339 aaKnown RBP20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 POTEEQ6S8J3 1075 aa20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 BLIDQ8IZY5 108 aa20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 BICD2Q8TD16 824 aa20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 CUL5Q93034 780 aa20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 PAGR1Q9BTK6 254 aa20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 RIC8AQ9NPQ8 531 aa20.36■□□□□ 0.85
SMARCD3-212ENST00000485610 PLXNB2O15031 1838 aa20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 ALAS1P13196 640 aa20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 STAT3P40763 770 aa20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 TM4SF4P48230 202 aa20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 PLS1Q14651 629 aa20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 TKFCQ3LXA3 575 aa20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 FOXD4L5Q5VV16 416 aaPredicted RBP20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 FERMT3Q86UX7 667 aa20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 TEX2Q8IWB9 1127 aa20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 REM2Q8IYK8 340 aaPredicted RBP20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 FOXD4L4Q8WXT5 416 aaPredicted RBP20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 FOXP1Q9H334 677 aaPredicted RBP20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 BTBD7Q9P203 1132 aa20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 ZNFX1Q9P2E3 1918 aaKnown RBP20.35■□□□□ 0.85
SMARCD3-212ENST00000485610 CNMDO75829 334 aa20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 MRPL12P52815 198 aaKnown RBP20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 RESTQ13127 1097 aa20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 TAF1CQ15572 869 aaPredicted RBP20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 ZIC5Q96T25 663 aa20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 SPATC1LQ9H0A9 340 aa20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 ZSCAN16Q9H4T2 348 aaPredicted RBP20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 PSTPIP2Q9H939 334 aa20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 RBPJLQ9UBG7 517 aa20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 LCTP09848 1927 aa20.34■□□□□ 0.85
SMARCD3-212ENST00000485610 BTBD18B2RXH4 712 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 KIF28PB7ZC32 967 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 OPLAHO14841 1288 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 AOC2O75106 756 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 U2AF2P26368 475 aaKnown RBP eCLIP20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 COPB2P35606 906 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 BRAPQ7Z569 592 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 RIOX2Q8IUF8 465 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 REXO1Q8N1G1 1221 aaKnown RBP20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 OXER1Q8TDS5 423 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 TXNRD2Q9NNW7 524 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 RNF146Q9NTX7 359 aa20.33■□□□□ 0.85
SMARCD3-212ENST00000485610 NR5A1Q13285 461 aa20.32■□□□□ 0.84
SMARCD3-212ENST00000485610 NOSTRINQ8IVI9 506 aa20.32■□□□□ 0.84
SMARCD3-212ENST00000485610 TRERF1Q96PN7 1200 aa20.32■□□□□ 0.84
SMARCD3-212ENST00000485610 HOMER2Q9NSB8 354 aa20.32■□□□□ 0.84
SMARCD3-212ENST00000485610 ADGRA2Q96PE1 1338 aa20.32■□□□□ 0.84
SMARCD3-212ENST00000485610 M0R2N6 131 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 ERVK-9P63128 1117 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 ERVK-24P63145 666 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 MCF2L2Q86YR7 1114 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 CLEC4DQ8WXI8 215 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 TNFRSF25Q93038 417 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 ACAD9Q9H845 621 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 MORF4L1Q9UBU8 362 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 RIPK3Q9Y572 518 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 ATP6V1DQ9Y5K8 247 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 MGAMO43451 1857 aa20.31■□□□□ 0.84
SMARCD3-212ENST00000485610 PIK3CDO00329 1044 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 NFIBO00712 420 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 ADAMTS3O15072 1205 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 PEX10O60683 326 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 SLC25A27O95847 323 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 ALDH1A1P00352 501 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 HTRA3P83110 453 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 UBE2SQ16763 222 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 MUM1L1Q5H9M0 696 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 SAMD3Q8N6K7 520 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 CHST13Q8NET6 341 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 MOV10L1Q9BXT6 1211 aaKnown RBP20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 FBXO40Q9UH90 709 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 PCDHA6Q9UN73 950 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 PCDHA8Q9Y5H6 950 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 PLXNA1Q9UIW2 1896 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 GCOM1H8Y6P7 765 aaPredicted RBP20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 POLR2MP0CAP2 368 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 MAP2K2P36507 400 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 CLK2P49760 499 aaKnown RBP20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 VEGFBP49765 207 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 CCNA1P78396 465 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 GHRHRQ02643 423 aa20.3■□□□□ 0.84
SMARCD3-212ENST00000485610 FAM110CQ1W6H9 321 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms