RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 LRCH3Q96II8 777 aa18.65■□□□□ 0.58
SIK3-211ENST00000485363 PRDM5Q9NQX1 630 aaPredicted RBP18.65■□□□□ 0.58
SIK3-211ENST00000485363 LTBP2Q14767 1821 aa18.65■□□□□ 0.58
SIK3-211ENST00000485363 B4E1Z4 1266 aa18.64■□□□□ 0.57
SIK3-211ENST00000485363 CST5P28325 142 aaPredicted RBP18.64■□□□□ 0.57
SIK3-211ENST00000485363 KCNA10Q16322 511 aa18.64■□□□□ 0.57
SIK3-211ENST00000485363 GPATCH4Q5T3I0 446 aaKnown RBP18.64■□□□□ 0.57
SIK3-211ENST00000485363 NUP133Q8WUM0 1156 aa18.64■□□□□ 0.57
SIK3-211ENST00000485363 KRT23Q9C075 422 aa18.64■□□□□ 0.57
SIK3-211ENST00000485363 KATNBL1Q9H079 304 aa18.64■□□□□ 0.57
SIK3-211ENST00000485363 CNNM2Q9H8M5 875 aa18.64■□□□□ 0.57
SIK3-211ENST00000485363 STARD7Q9NQZ5 370 aa18.64■□□□□ 0.57
SIK3-211ENST00000485363 RAD50Q92878 1312 aa18.64■□□□□ 0.57
SIK3-211ENST00000485363 ADCY6O43306 1168 aa18.63■□□□□ 0.57
SIK3-211ENST00000485363 C6orf222P0C671 652 aaPredicted RBP18.63■□□□□ 0.57
SIK3-211ENST00000485363 GJA9P57773 515 aa18.63■□□□□ 0.57
SIK3-211ENST00000485363 TLE2Q04725 743 aa18.63■□□□□ 0.57
SIK3-211ENST00000485363 CCSAPQ6IQ19 270 aaPredicted RBP18.63■□□□□ 0.57
SIK3-211ENST00000485363 PCSK9Q8NBP7 692 aaKnown RBP18.63■□□□□ 0.57
SIK3-211ENST00000485363 PNMA1Q8ND90 353 aa18.63■□□□□ 0.57
SIK3-211ENST00000485363 RUFY2Q8WXA3 655 aa18.63■□□□□ 0.57
SIK3-211ENST00000485363 ZSCAN10Q96SZ4 725 aaPredicted RBP18.63■□□□□ 0.57
SIK3-211ENST00000485363 UPF3AQ9H1J1 476 aaKnown RBP18.63■□□□□ 0.57
SIK3-211ENST00000485363 IL25Q9H293 177 aa18.63■□□□□ 0.57
SIK3-211ENST00000485363 KAT14Q9H8E8 782 aa18.63■□□□□ 0.57
SIK3-211ENST00000485363 PDLIM7Q9NR12 457 aa18.63■□□□□ 0.57
SIK3-211ENST00000485363 LCTP09848 1927 aa18.62■□□□□ 0.57
SIK3-211ENST00000485363 MYADML2A6NDP7 307 aa18.62■□□□□ 0.57
SIK3-211ENST00000485363 TNFAIP2Q03169 654 aa18.62■□□□□ 0.57
SIK3-211ENST00000485363 BAATQ14032 418 aaPredicted RBP18.62■□□□□ 0.57
SIK3-211ENST00000485363 ANKS1AQ92625 1134 aa18.62■□□□□ 0.57
SIK3-211ENST00000485363 GLT1D1Q96MS3 346 aa18.62■□□□□ 0.57
SIK3-211ENST00000485363 ZSWIM5Q9P217 1185 aa18.62■□□□□ 0.57
SIK3-211ENST00000485363 ADD3Q9UEY8 706 aaKnown RBP18.62■□□□□ 0.57
SIK3-211ENST00000485363 ASTN1O14525 1302 aa18.62■□□□□ 0.57
SIK3-211ENST00000485363 WDR19Q8NEZ3 1342 aa18.62■□□□□ 0.57
SIK3-211ENST00000485363 LRRC37A2A6NM11 1700 aa18.61■□□□□ 0.57
SIK3-211ENST00000485363 NFIBO00712 420 aa18.61■□□□□ 0.57
SIK3-211ENST00000485363 PQBP1O60828 265 aaKnown RBP18.61■□□□□ 0.57
SIK3-211ENST00000485363 CLTBP09497 229 aa18.61■□□□□ 0.57
SIK3-211ENST00000485363 GOLGA8HP0CJ92 632 aa18.61■□□□□ 0.57
SIK3-211ENST00000485363 GNASQ5JWF2 1037 aa18.61■□□□□ 0.57
SIK3-211ENST00000485363 GPR153Q6NV75 609 aa18.61■□□□□ 0.57
SIK3-211ENST00000485363 NOL8Q76FK4 1167 aaKnown RBP18.61■□□□□ 0.57
SIK3-211ENST00000485363 UBAC1Q9BSL1 405 aa18.61■□□□□ 0.57
SIK3-211ENST00000485363 ELP1O95163 1332 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 TNKSO95271 1327 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.6■□□□□ 0.57
SIK3-211ENST00000485363 PTPDC1A2A3K4 754 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 TRIM43BA6NCK2 446 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 ASGR1P07306 291 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 IRX5P78411 483 aaPredicted RBP18.6■□□□□ 0.57
SIK3-211ENST00000485363 SH3RF1Q7Z6J0 888 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 ENAHQ8N8S7 591 aaPredicted RBP18.6■□□□□ 0.57
SIK3-211ENST00000485363 MORC4Q8TE76 937 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 CLEC4DQ8WXI8 215 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 BADQ92934 168 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 TRIM43Q96BQ3 446 aaPredicted RBP18.6■□□□□ 0.57
SIK3-211ENST00000485363 TOX2Q96NM4 488 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 UBA5Q9GZZ9 404 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 VTA1Q9NP79 307 aa18.6■□□□□ 0.57
SIK3-211ENST00000485363 LOC102724159A0A0B4J2E5 919 aa18.59■□□□□ 0.57
SIK3-211ENST00000485363 CHMLP26374 656 aa18.59■□□□□ 0.57
SIK3-211ENST00000485363 NKX3-2P78367 333 aa18.59■□□□□ 0.57
SIK3-211ENST00000485363 PWP2Q15269 919 aaKnown RBP18.59■□□□□ 0.57
SIK3-211ENST00000485363 IQSEC1Q6DN90 963 aa18.59■□□□□ 0.57
SIK3-211ENST00000485363 RNF207Q6ZRF8 634 aa18.59■□□□□ 0.57
SIK3-211ENST00000485363 EEPD1Q7L9B9 569 aa18.59■□□□□ 0.57
SIK3-211ENST00000485363 ANKRD33Q7Z3H0 272 aa18.59■□□□□ 0.57
SIK3-211ENST00000485363 FBXO16Q8IX29 292 aaPredicted RBP18.59■□□□□ 0.57
SIK3-211ENST00000485363 PURBQ96QR8 312 aaKnown RBP18.59■□□□□ 0.57
SIK3-211ENST00000485363 GNEQ9Y223 722 aaKnown RBP18.59■□□□□ 0.57
SIK3-211ENST00000485363 DCDC2CA8MYV0 355 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 CALML3P27482 149 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 ALDH5A1P51649 535 aaPredicted RBP18.58■□□□□ 0.56
SIK3-211ENST00000485363 TRDNQ13061 729 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 ASPRV1Q53RT3 343 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 IFIT1BQ5T764 474 aaKnown RBP18.58■□□□□ 0.56
SIK3-211ENST00000485363 TAPT1Q6NXT6 567 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 SLC30A10Q6XR72 485 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 TLK2Q86UE8 772 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 VTI1AQ96AJ9 217 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 AP5M1Q9H0R1 490 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 CPVLQ9H3G5 476 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 PDGFCQ9NRA1 345 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 TMEM39AQ9NV64 488 aa18.58■□□□□ 0.56
SIK3-211ENST00000485363 DDX49Q9Y6V7 483 aaKnown RBP18.58■□□□□ 0.56
SIK3-211ENST00000485363 MYH6P13533 1939 aa18.57■□□□□ 0.56
SIK3-211ENST00000485363 MROH7Q68CQ1 1323 aa18.57■□□□□ 0.56
SIK3-211ENST00000485363 A0A0U1RQG5 324 aaPredicted RBP18.57■□□□□ 0.56
SIK3-211ENST00000485363 KIAA0355O15063 1070 aa18.57■□□□□ 0.56
SIK3-211ENST00000485363 CTAGE5O15320 804 aa18.57■□□□□ 0.56
SIK3-211ENST00000485363 PARP1P09874 1014 aaKnown RBP18.57■□□□□ 0.56
SIK3-211ENST00000485363 RAG1P15918 1043 aa18.57■□□□□ 0.56
SIK3-211ENST00000485363 SMPD1P17405 629 aa18.57■□□□□ 0.56
SIK3-211ENST00000485363 RPS6P62753 249 aaKnown RBP18.57■□□□□ 0.56
SIK3-211ENST00000485363 BEX3Q00994 111 aa18.57■□□□□ 0.56
SIK3-211ENST00000485363 FAAP100Q0VG06 881 aa18.57■□□□□ 0.56
SIK3-211ENST00000485363 CDC37Q16543 378 aaPredicted RBP18.57■□□□□ 0.56
SIK3-211ENST00000485363 USH1GQ495M9 461 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms