RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 PLEKHM2Q8IWE5 1019 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 RBCK1Q9BYM8 510 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 TRIM55Q9BYV6 548 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 NGRNQ9NPE2 291 aaKnown RBP6.2□□□□□ -1.42
CCDC39-205ENST00000485055 SYNPO2Q9UMS6 1093 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 PHF20L1A8MW92 1017 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 GPR182O15218 404 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 AKAP10O43572 662 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 FBXO45P0C2W1 286 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 FLT3P36888 993 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 PPM1FP49593 454 aaPredicted RBP6.2□□□□□ -1.42
CCDC39-205ENST00000485055 CLK1P49759 484 aaKnown RBP6.2□□□□□ -1.42
CCDC39-205ENST00000485055 ST13P50502 369 aaKnown RBP6.2□□□□□ -1.42
CCDC39-205ENST00000485055 GSTO1P78417 241 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 PDE3AQ14432 1141 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 SPECC1Q5M775 1068 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.2□□□□□ -1.42
CCDC39-205ENST00000485055 ERO1BQ86YB8 467 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 CCDC47Q96A33 483 aaKnown RBP6.2□□□□□ -1.42
CCDC39-205ENST00000485055 TMEM87BQ96K49 555 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 ZNF341Q9BYN7 854 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 RLFQ13129 1914 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 SERPINB3P29508 390 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 GYG1P46976 350 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 OTUD7BQ6GQQ9 843 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 RPAP2Q8IXW5 612 aaPredicted RBP6.2□□□□□ -1.42
CCDC39-205ENST00000485055 NKX2-3Q8TAU0 364 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 OSBPL5Q9H0X9 879 aaPredicted RBP6.2□□□□□ -1.42
CCDC39-205ENST00000485055 DAGLAQ9Y4D2 1042 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 LRRFIP2Q9Y608 721 aaKnown RBP6.2□□□□□ -1.42
CCDC39-205ENST00000485055 ADGRG1Q9Y653 693 aa6.2□□□□□ -1.42
CCDC39-205ENST00000485055 FRMPD3Q5JV73 1810 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 MROH7-TTC4A0A0A0MT08 1334 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 IGHA2P01877 340 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 SSBP05455 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
CCDC39-205ENST00000485055 CD46P15529 392 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 VARSP26640 1264 aaKnown RBP6.19□□□□□ -1.42
CCDC39-205ENST00000485055 ATICP31939 592 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 GJA5P36382 358 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 CCDC102BQ68D86 513 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 FBXO46Q6PJ61 603 aaPredicted RBP6.19□□□□□ -1.42
CCDC39-205ENST00000485055 ERC1Q8IUD2 1116 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 KIAA0825Q8IV33 1275 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 CLASRPQ8N2M8 674 aaKnown RBP6.19□□□□□ -1.42
CCDC39-205ENST00000485055 MEIS3Q99687 375 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 MXD3Q9BW11 206 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 GGT7Q9UJ14 662 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 SNCAIPQ9Y6H5 919 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 GPR25O00155 361 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 FKTNO75072 461 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 AGR2O95994 175 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 IFIT2P09913 472 aaKnown RBP6.19□□□□□ -1.42
CCDC39-205ENST00000485055 BCAMP50895 628 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 WASHC5Q12768 1159 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 ARHGEF6Q15052 776 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 DNAJC21Q5F1R6 531 aaKnown RBP6.19□□□□□ -1.42
CCDC39-205ENST00000485055 ARSHQ5FYA8 562 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 SKA1Q96BD8 255 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 ERO1AQ96HE7 468 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 ZIC5Q96T25 663 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 MCOLN1Q9GZU1 580 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 EHD4Q9H223 541 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 FAM198AQ9UFP1 575 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 IPPQ9Y573 584 aa6.19□□□□□ -1.42
CCDC39-205ENST00000485055 AOX1Q06278 1338 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 MYH8P13535 1937 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 A0A1W2PRQ8 180 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 PRRT4C9JH25 899 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 KLF4O43474 513 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 TCEA3O75764 348 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 RHOBTB3O94955 611 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 CETPP11597 493 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 TNFAIP3P21580 790 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 IRX3P78415 501 aaPredicted RBP6.18□□□□□ -1.42
CCDC39-205ENST00000485055 CDC42EP5Q6NZY7 148 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 PADI6Q6TGC4 694 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 CPXCR1Q8N123 301 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 GPRASP2Q96D09 838 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 SLC10A4Q96EP9 437 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 FEZ1Q99689 392 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 EIF2AK1Q9BQI3 630 aaKnown RBP6.18□□□□□ -1.42
CCDC39-205ENST00000485055 FAM13BQ9NYF5 915 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 PCDH10Q9P2E7 1040 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 PCDHGC3Q9UN70 934 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 CTNND1O60716 968 aaKnown RBP6.18□□□□□ -1.42
CCDC39-205ENST00000485055 PLCG2P16885 1265 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 RAB33AQ14088 237 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 GRIK5Q16478 980 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 ALFQ53S48 1182 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 NBPF12Q5TAG4 269 aaPredicted RBP6.18□□□□□ -1.42
CCDC39-205ENST00000485055 DGKHQ86XP1 1220 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 ATRIPQ8WXE1 791 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 WDR18Q9BV38 432 aa6.18□□□□□ -1.42
CCDC39-205ENST00000485055 DHX36Q9H2U1 1008 aaKnown RBP6.18□□□□□ -1.42
CCDC39-205ENST00000485055 A0A0G2JLL6 359 aaPredicted RBP6.17□□□□□ -1.42
CCDC39-205ENST00000485055 UBE2Q2LH0YL09 131 aa6.17□□□□□ -1.42
CCDC39-205ENST00000485055 DKK1O94907 266 aa6.17□□□□□ -1.42
CCDC39-205ENST00000485055 HALP42357 657 aa6.17□□□□□ -1.42
CCDC39-205ENST00000485055 ZCCHC8Q6NZY4 707 aaKnown RBP6.17□□□□□ -1.42
CCDC39-205ENST00000485055 PRRT2Q7Z6L0 340 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms