RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CDC45O75419 566 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 PGK1P00558 417 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 RARBP10826 455 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 AKR1A1P14550 325 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 ATN1P54259 1190 aaPredicted RBP14.35□□□□□ -0.11
MSH5-216ENST00000484309 BAATQ14032 418 aaPredicted RBP14.35□□□□□ -0.11
MSH5-216ENST00000484309 COL9A3Q14050 684 aaPredicted RBP14.35□□□□□ -0.11
MSH5-216ENST00000484309 WTAPQ15007 396 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 LRRC26Q2I0M4 334 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 MAMDC4Q6UXC1 1216 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 SLC30A10Q6XR72 485 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 ZNF467Q7Z7K2 595 aaPredicted RBP14.35□□□□□ -0.11
MSH5-216ENST00000484309 MB21D2Q8IYB1 491 aaPredicted RBP14.35□□□□□ -0.11
MSH5-216ENST00000484309 ADGRF4Q8IZF3 695 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 XPNPEP3Q9NQH7 507 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 NRBP1Q9UHY1 535 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 ZMYND8Q9ULU4 1186 aaPredicted RBP14.35□□□□□ -0.11
MSH5-216ENST00000484309 NR2E3Q9Y5X4 410 aa14.35□□□□□ -0.11
MSH5-216ENST00000484309 ERICH2A1L162 156 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 KBTBD13C9JR72 458 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 DNM1LO00429 736 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 ADCY6O43306 1168 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 CALML3P27482 149 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 ACVR2BQ13705 512 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 LRRC41Q15345 812 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 TMEM67Q5HYA8 995 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 CREB3L3Q68CJ9 461 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 MSL3Q8N5Y2 521 aaKnown RBP14.34□□□□□ -0.11
MSH5-216ENST00000484309 ARRDC4Q8NCT1 418 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 CLEC4DQ8WXI8 215 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 FERMT2Q96AC1 680 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 GPHNQ9NQX3 736 aaPredicted RBP14.34□□□□□ -0.11
MSH5-216ENST00000484309 KIAA1217Q5T5P2 1943 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 WDR19Q8NEZ3 1342 aa14.34□□□□□ -0.11
MSH5-216ENST00000484309 SYN1P17600 705 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 IRX5P78411 483 aaPredicted RBP14.33□□□□□ -0.12
MSH5-216ENST00000484309 SART3Q15020 963 aaKnown RBP14.33□□□□□ -0.12
MSH5-216ENST00000484309 QRICH1Q2TAL8 776 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 CCDC144BQ3MJ40 725 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 CASC1Q6TDU7 716 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 EEPD1Q7L9B9 569 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 ABHD16BQ9H3Z7 469 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 JMJD4Q9H9V9 463 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 MAD2L2Q9UI95 211 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 FAM184BQ9ULE4 1060 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 COLQQ9Y215 455 aaPredicted RBP14.33□□□□□ -0.12
MSH5-216ENST00000484309 SYNRGQ9UMZ2 1314 aa14.33□□□□□ -0.12
MSH5-216ENST00000484309 LTBP2Q14767 1821 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 KLRF2D3W0D1 207 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 PRC1O43663 620 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 PTGS1P23219 599 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 ADCYAP1R1P41586 468 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 GRM4Q14833 912 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 NECTIN1Q15223 517 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
MSH5-216ENST00000484309 MYL10Q9BUA6 226 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 LRRC2Q9BYS8 371 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 KATNBL1Q9H079 304 aa14.32□□□□□ -0.12
MSH5-216ENST00000484309 MYH7BA7E2Y1 1941 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.31□□□□□ -0.12
MSH5-216ENST00000484309 MYADML2A6NDP7 307 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 ASB14A6NK59 587 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 ALDH5A1P51649 535 aaPredicted RBP14.31□□□□□ -0.12
MSH5-216ENST00000484309 RPS6P62753 249 aaKnown RBP14.31□□□□□ -0.12
MSH5-216ENST00000484309 SLC35G1Q2M3R5 365 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 HOMER1Q86YM7 354 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 RAB11FIP4Q86YS3 637 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 IGDCC4Q8TDY8 1250 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 NUP133Q8WUM0 1156 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 TBC1D5Q92609 795 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 LY9Q9HBG7 655 aa14.31□□□□□ -0.12
MSH5-216ENST00000484309 PALM3A6NDB9 673 aaPredicted RBP14.3□□□□□ -0.12
MSH5-216ENST00000484309 ADAMTS4O75173 837 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 CENPBP07199 599 aaPredicted RBP14.3□□□□□ -0.12
MSH5-216ENST00000484309 MCM5P33992 734 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 RTP1P59025 263 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 NOL8Q76FK4 1167 aaKnown RBP14.3□□□□□ -0.12
MSH5-216ENST00000484309 CATIPQ7Z7H3 387 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 RNF180Q86T96 592 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 FBXO11Q86XK2 927 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 PDGFCQ9NRA1 345 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 PNMA2Q9UL42 364 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 ATP11BQ9Y2G3 1177 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 ABCB11O95342 1321 aa14.3□□□□□ -0.12
MSH5-216ENST00000484309 SH2B2O14492 632 aaPredicted RBP14.29□□□□□ -0.12
MSH5-216ENST00000484309 PPP1R11O60927 126 aaPredicted RBP14.29□□□□□ -0.12
MSH5-216ENST00000484309 DUSP11O75319 330 aaKnown RBP14.29□□□□□ -0.12
MSH5-216ENST00000484309 C6orf222P0C671 652 aaPredicted RBP14.29□□□□□ -0.12
MSH5-216ENST00000484309 RXRAP19793 462 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 TROAPQ12815 778 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 HABP4Q5JVS0 413 aaKnown RBP14.29□□□□□ -0.12
MSH5-216ENST00000484309 TMEM63BQ5T3F8 832 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 SLC39A5Q6ZMH5 540 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 NFXL1Q6ZNB6 911 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 RASEFQ8IZ41 740 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 ZNF654Q8IZM8 581 aa14.29□□□□□ -0.12
MSH5-216ENST00000484309 TCEANC2Q96MN5 208 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms