RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 ABCB11O95342 1321 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 POTEB2H3BUK9 544 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 TRIM32Q13049 653 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 MUM1L1Q5H9M0 696 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 APOA5Q6Q788 366 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 Q6ZUG5 572 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 RUFY3Q7L099 469 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 FANCBQ8NB91 859 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 SPZ1Q9BXG8 430 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 AMNQ9BXJ7 453 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.27■□□□□ 0.684e-10■■■■□ 24
HMGN1-214ENST00000482733 PAK6Q9NQU5 681 aaPredicted RBP19.27■□□□□ 0.68
HMGN1-214ENST00000482733 NRBP1Q9UHY1 535 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 CYP46A1Q9Y6A2 500 aa19.27■□□□□ 0.68
HMGN1-214ENST00000482733 ZBTB43O43298 467 aa19.26■□□□□ 0.67
HMGN1-214ENST00000482733 CPA1P15085 419 aa19.26■□□□□ 0.67
HMGN1-214ENST00000482733 USH1GQ495M9 461 aa19.26■□□□□ 0.67
HMGN1-214ENST00000482733 NSMFQ6X4W1 530 aa19.26■□□□□ 0.67
HMGN1-214ENST00000482733 MICU3Q86XE3 530 aa19.26■□□□□ 0.67
HMGN1-214ENST00000482733 RGS22Q8NE09 1264 aa19.26■□□□□ 0.67
HMGN1-214ENST00000482733 CLEC4DQ8WXI8 215 aa19.26■□□□□ 0.67
HMGN1-214ENST00000482733 TINF2Q9BSI4 451 aa19.26■□□□□ 0.67
HMGN1-214ENST00000482733 RBM28Q9NW13 759 aaKnown RBP19.26■□□□□ 0.67
HMGN1-214ENST00000482733 CYP39A1Q9NYL5 469 aa19.26■□□□□ 0.67
HMGN1-214ENST00000482733 MRPL11Q9Y3B7 192 aaKnown RBP19.26■□□□□ 0.67
HMGN1-214ENST00000482733 PNMA6FA0A0J9YX94 578 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 KLF18A0A0U1RQI7 1052 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 POTEFA5A3E0 1075 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 CYP2C19P33261 490 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 GJA8P48165 433 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 RGS19P49795 217 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 PPP2R5BQ15173 497 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 MAMDC4Q6UXC1 1216 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 MCF2L2Q86YR7 1114 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 FAM133AQ8N9E0 248 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 AGXT2Q9BYV1 514 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 BRPF3Q9ULD4 1205 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 SYNGAP1Q96PV0 1343 aa19.25■□□□□ 0.67
HMGN1-214ENST00000482733 NFIBO00712 420 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 CYTH3O43739 400 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 SGPL1O95470 568 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 TAL1P17542 331 aaPredicted RBP19.24■□□□□ 0.67
HMGN1-214ENST00000482733 RXRAP19793 462 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 C8orf34Q49A92 452 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 RNF207Q6ZRF8 634 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 HOMER1Q86YM7 354 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 U2AF1L4Q8WU68 220 aaKnown RBP19.24■□□□□ 0.67
HMGN1-214ENST00000482733 BRF1Q92994 677 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 RRP36Q96EU6 259 aaKnown RBP19.24■□□□□ 0.67
HMGN1-214ENST00000482733 DEFB118Q96PH6 123 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 PIGSQ96S52 555 aa19.24■□□□□ 0.67
HMGN1-214ENST00000482733 PTPDC1A2A3K4 754 aa19.23■□□□□ 0.67
HMGN1-214ENST00000482733 MSCO60682 206 aa19.23■□□□□ 0.67
HMGN1-214ENST00000482733 BAATQ14032 418 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-214ENST00000482733 RTN1Q16799 776 aa19.23■□□□□ 0.67
HMGN1-214ENST00000482733 SLC35G1Q2M3R5 365 aa19.23■□□□□ 0.67
HMGN1-214ENST00000482733 TMTC3Q6ZXV5 915 aa19.23■□□□□ 0.67
HMGN1-214ENST00000482733 CCDC144CPQ8IYA2 1237 aa19.23■□□□□ 0.67
HMGN1-214ENST00000482733 SRBD1Q8N5C6 995 aaKnown RBP19.23■□□□□ 0.67
HMGN1-214ENST00000482733 IL17RAQ96F46 866 aa19.23■□□□□ 0.67
HMGN1-214ENST00000482733 ADD3Q9UEY8 706 aaKnown RBP19.23■□□□□ 0.67
HMGN1-214ENST00000482733 SEC63Q9UGP8 760 aaKnown RBP19.23■□□□□ 0.67
HMGN1-214ENST00000482733 CNPY2Q9Y2B0 182 aa19.23■□□□□ 0.67
HMGN1-214ENST00000482733 PCDHA1Q9Y5I3 950 aa19.23■□□□□ 0.67
HMGN1-214ENST00000482733 LOC102724159A0A0B4J2E5 919 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 CCDC196A0A1B0GTZ2 297 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 ASB14A6NK59 587 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 GOLGA8AA7E2F4 631 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 GOLGA8BA8MQT2 603 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 SEC24BO95487 1268 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 CYBAP13498 195 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 EN2P19622 333 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-214ENST00000482733 APOBRQ0VD83 1088 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 PWP2Q15269 919 aaKnown RBP19.22■□□□□ 0.67
HMGN1-214ENST00000482733 RAB11FIP4Q86YS3 637 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 SAMD3Q8N6K7 520 aa19.22■□□□□ 0.67
HMGN1-214ENST00000482733 NAP1L2Q9ULW6 460 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-214ENST00000482733 CCND3P30281 292 aaPredicted RBP19.21■□□□□ 0.67
HMGN1-214ENST00000482733 METAP2P50579 478 aaKnown RBP eCLIP19.21■□□□□ 0.67
HMGN1-214ENST00000482733 EVCP57679 992 aa19.21■□□□□ 0.67
HMGN1-214ENST00000482733 RPS6P62753 249 aaKnown RBP19.21■□□□□ 0.67
HMGN1-214ENST00000482733 CNTN2Q02246 1040 aa19.21■□□□□ 0.67
HMGN1-214ENST00000482733 FGD4Q96M96 766 aa19.21■□□□□ 0.67
HMGN1-214ENST00000482733 MPHOSPH6Q99547 160 aaKnown RBP19.21■□□□□ 0.67
HMGN1-214ENST00000482733 UPF3BQ9BZI7 483 aaKnown RBP19.21■□□□□ 0.67
HMGN1-214ENST00000482733 CRISPLD2Q9H0B8 497 aa19.21■□□□□ 0.67
HMGN1-214ENST00000482733 PDRG1Q9NUG6 133 aa19.21■□□□□ 0.67
HMGN1-214ENST00000482733 MAP3K20Q9NYL2 800 aaKnown RBP19.21■□□□□ 0.67
HMGN1-214ENST00000482733 SOWAHBA6NEL2 793 aa19.2■□□□□ 0.66
HMGN1-214ENST00000482733 SEPT4O43236 478 aa19.2■□□□□ 0.66
HMGN1-214ENST00000482733 PPP1R11O60927 126 aaPredicted RBP19.2■□□□□ 0.66
HMGN1-214ENST00000482733 TFRCP02786 760 aaKnown RBP19.2■□□□□ 0.66
HMGN1-214ENST00000482733 CALML3P27482 149 aa19.2■□□□□ 0.66
HMGN1-214ENST00000482733 CNGA1P29973 690 aa19.2■□□□□ 0.66
HMGN1-214ENST00000482733 ARMCX2Q7L311 632 aa19.2■□□□□ 0.66
HMGN1-214ENST00000482733 TRPV1Q8NER1 839 aa19.2■□□□□ 0.66
HMGN1-214ENST00000482733 ABHD16BQ9H3Z7 469 aa19.2■□□□□ 0.66
HMGN1-214ENST00000482733 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms