RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 CYP39A1Q9NYL5 469 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 ZSWIM5Q9P217 1185 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 PCDH10Q9P2E7 1040 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 PNMA2Q9UL42 364 aa18.35■□□□□ 0.53
COL16A1-212ENST00000482478 LCTP09848 1927 aa18.34■□□□□ 0.53
COL16A1-212ENST00000482478 ERICH2A1L162 156 aa18.34■□□□□ 0.53
COL16A1-212ENST00000482478 MAGEA10P43363 369 aaPredicted RBP18.34■□□□□ 0.53
COL16A1-212ENST00000482478 FXR1P51114 621 aaKnown RBP eCLIP18.34■□□□□ 0.53
COL16A1-212ENST00000482478 TRIM60Q495X7 471 aa18.34■□□□□ 0.53
COL16A1-212ENST00000482478 NOL8Q76FK4 1167 aaKnown RBP18.34■□□□□ 0.53
COL16A1-212ENST00000482478 SKAP1Q86WV1 359 aa18.34■□□□□ 0.53
COL16A1-212ENST00000482478 FBXO16Q8IX29 292 aaPredicted RBP18.34■□□□□ 0.53
COL16A1-212ENST00000482478 SPC25Q9HBM1 224 aa18.34■□□□□ 0.53
COL16A1-212ENST00000482478 SOWAHBA6NEL2 793 aa18.33■□□□□ 0.52
COL16A1-212ENST00000482478 ADAMTS4O75173 837 aa18.33■□□□□ 0.52
COL16A1-212ENST00000482478 C6orf222P0C671 652 aaPredicted RBP18.33■□□□□ 0.52
COL16A1-212ENST00000482478 CALML3P27482 149 aa18.33■□□□□ 0.52
COL16A1-212ENST00000482478 SART3Q15020 963 aaKnown RBP18.33■□□□□ 0.52
COL16A1-212ENST00000482478 CCDC144BQ3MJ40 725 aa18.33■□□□□ 0.52
COL16A1-212ENST00000482478 CYB5R4Q7L1T6 521 aa18.33■□□□□ 0.52
COL16A1-212ENST00000482478 NCOA7Q8NI08 942 aa18.33■□□□□ 0.52
COL16A1-212ENST00000482478 UBA5Q9GZZ9 404 aa18.33■□□□□ 0.52
COL16A1-212ENST00000482478 ADD3Q9UEY8 706 aaKnown RBP18.33■□□□□ 0.52
COL16A1-212ENST00000482478 PHF24Q9UPV7 400 aa18.33■□□□□ 0.52
COL16A1-212ENST00000482478 RBM8AQ9Y5S9 174 aaKnown RBP18.33■□□□□ 0.52
COL16A1-212ENST00000482478 ASTN1O14525 1302 aa18.32■□□□□ 0.52
COL16A1-212ENST00000482478 A0A1W2PQ45 241 aaPredicted RBP18.32■□□□□ 0.52
COL16A1-212ENST00000482478 A0A1W2PQY0 241 aa18.32■□□□□ 0.52
COL16A1-212ENST00000482478 BAATQ14032 418 aaPredicted RBP18.32■□□□□ 0.52
COL16A1-212ENST00000482478 RNF207Q6ZRF8 634 aa18.32■□□□□ 0.52
COL16A1-212ENST00000482478 EEPD1Q7L9B9 569 aa18.32■□□□□ 0.52
COL16A1-212ENST00000482478 DDX49Q9Y6V7 483 aaKnown RBP18.32■□□□□ 0.52
COL16A1-212ENST00000482478 MYADML2A6NDP7 307 aa18.31■□□□□ 0.52
COL16A1-212ENST00000482478 E7EWF7 191 aa18.31■□□□□ 0.52
COL16A1-212ENST00000482478 IFIT3O14879 490 aaKnown RBP18.31■□□□□ 0.52
COL16A1-212ENST00000482478 ADCY6O43306 1168 aa18.31■□□□□ 0.52
COL16A1-212ENST00000482478 DUSP11O75319 330 aaKnown RBP18.31■□□□□ 0.52
COL16A1-212ENST00000482478 ALDH5A1P51649 535 aaPredicted RBP18.31■□□□□ 0.52
COL16A1-212ENST00000482478 MDM2Q00987 491 aaPredicted RBP18.31■□□□□ 0.52
COL16A1-212ENST00000482478 SLC39A5Q6ZMH5 540 aa18.31■□□□□ 0.52
COL16A1-212ENST00000482478 ANKS1AQ92625 1134 aa18.31■□□□□ 0.52
COL16A1-212ENST00000482478 PURBQ96QR8 312 aaKnown RBP18.31■□□□□ 0.52
COL16A1-212ENST00000482478 MPHOSPH6Q99547 160 aaKnown RBP18.31■□□□□ 0.52
COL16A1-212ENST00000482478 LBHD1Q9BQE6 289 aaPredicted RBP18.31■□□□□ 0.52
COL16A1-212ENST00000482478 PRO3102Q9H379 93 aa18.31■□□□□ 0.52
COL16A1-212ENST00000482478 ANO2Q9NQ90 1003 aa18.31■□□□□ 0.52
COL16A1-212ENST00000482478 STARD7Q9NQZ5 370 aa18.31■□□□□ 0.52
COL16A1-212ENST00000482478 ABCB11O95342 1321 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 RANBP2P49792 3224 aaKnown RBP18.3■□□□□ 0.52
COL16A1-212ENST00000482478 A0A1W2PPC1 479 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 PQBP1O60828 265 aaKnown RBP18.3■□□□□ 0.52
COL16A1-212ENST00000482478 NEFLP07196 543 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 WTAPQ15007 396 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 BMP2KLQ5H9B9 411 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 CASC1Q6TDU7 716 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 STOX1Q6ZVD7 989 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 TLK2Q86UE8 772 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 ADGRF4Q8IZF3 695 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 CCDC136Q96JN2 1154 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 ESYT1Q9BSJ8 1104 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 UBE2OQ9C0C9 1292 aaKnown RBP18.3■□□□□ 0.52
COL16A1-212ENST00000482478 KATNBL1Q9H079 304 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 TAF6LQ9Y6J9 622 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 LTBP2Q14767 1821 aa18.3■□□□□ 0.52
COL16A1-212ENST00000482478 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.29■□□□□ 0.52
COL16A1-212ENST00000482478 MOXD2PA6NHM9 499 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 ACLYP53396 1101 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 TNFAIP2Q03169 654 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 SNX17Q15036 470 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 SEC23AQ15436 765 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 QRICH1Q2TAL8 776 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 TMEM67Q5HYA8 995 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 CHST3Q7LGC8 479 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 NUP133Q8WUM0 1156 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 CLEC4DQ8WXI8 215 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 GDF15Q99988 308 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 VTA1Q9NP79 307 aa18.29■□□□□ 0.52
COL16A1-212ENST00000482478 CST5P28325 142 aaPredicted RBP18.28■□□□□ 0.52
COL16A1-212ENST00000482478 RPS6P62753 249 aaKnown RBP18.28■□□□□ 0.52
COL16A1-212ENST00000482478 PDE4DQ08499 809 aa18.28■□□□□ 0.52
COL16A1-212ENST00000482478 HOMER1Q86YM7 354 aa18.28■□□□□ 0.52
COL16A1-212ENST00000482478 PCSK9Q8NBP7 692 aaKnown RBP18.28■□□□□ 0.52
COL16A1-212ENST00000482478 MAP4K1Q92918 833 aa18.28■□□□□ 0.52
COL16A1-212ENST00000482478 GLT1D1Q96MS3 346 aa18.28■□□□□ 0.52
COL16A1-212ENST00000482478 VAT1LQ9HCJ6 419 aa18.28■□□□□ 0.52
COL16A1-212ENST00000482478 SMCHD1A6NHR9 2005 aa18.27■□□□□ 0.52
COL16A1-212ENST00000482478 KCNA10Q16322 511 aa18.27■□□□□ 0.52
COL16A1-212ENST00000482478 FBXO11Q86XK2 927 aa18.27■□□□□ 0.52
COL16A1-212ENST00000482478 STAG2Q8N3U4 1231 aa18.27■□□□□ 0.52
COL16A1-212ENST00000482478 TSEN34Q9BSV6 310 aaKnown RBP18.27■□□□□ 0.52
COL16A1-212ENST00000482478 LSG1Q9H089 658 aaKnown RBP18.27■□□□□ 0.52
COL16A1-212ENST00000482478 AP5M1Q9H0R1 490 aa18.27■□□□□ 0.52
COL16A1-212ENST00000482478 UPF3AQ9H1J1 476 aaKnown RBP18.27■□□□□ 0.52
COL16A1-212ENST00000482478 PDLIM7Q9NR12 457 aa18.27■□□□□ 0.52
COL16A1-212ENST00000482478 MYH6P13533 1939 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 KLRF2D3W0D1 207 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 CLTBP09497 229 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 GJA9P57773 515 aa18.26■□□□□ 0.51
COL16A1-212ENST00000482478 IRX5P78411 483 aaPredicted RBP18.26■□□□□ 0.51
COL16A1-212ENST00000482478 BEX3Q00994 111 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms