RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 STAG2Q8N3U4 1231 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 ARRDC4Q8NCT1 418 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 SENP2Q9HC62 589 aa21.85■■□□□ 1.09
HSPG2-210ENST00000481644 ZHX1Q9UKY1 873 aaPredicted RBP21.85■■□□□ 1.09
HSPG2-210ENST00000481644 H0YGN5 161 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 DNM1LO00429 736 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 MYCNP04198 464 aaPredicted RBP21.84■■□□□ 1.09
HSPG2-210ENST00000481644 RARBP10826 455 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 MCM5P33992 734 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 GJC2Q5T442 439 aaPredicted RBP21.84■■□□□ 1.09
HSPG2-210ENST00000481644 CCDC144CPQ8IYA2 1237 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 IGDCC4Q8TDY8 1250 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 CLEC4DQ8WXI8 215 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 ABHD16BQ9H3Z7 469 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 VAT1LQ9HCJ6 419 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 NR2E3Q9Y5X4 410 aa21.84■■□□□ 1.09
HSPG2-210ENST00000481644 PTPDC1A2A3K4 754 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 ASB14A6NK59 587 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 KBTBD13C9JR72 458 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 KLRF2D3W0D1 207 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 PRC1O43663 620 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 ACVR2BQ13705 512 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 BAATQ14032 418 aaPredicted RBP21.83■■□□□ 1.09
HSPG2-210ENST00000481644 GRM4Q14833 912 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 JMJD4Q9H9V9 463 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 XPNPEP3Q9NQH7 507 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 MAD2L2Q9UI95 211 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 FAM184BQ9ULE4 1060 aa21.83■■□□□ 1.09
HSPG2-210ENST00000481644 PALM3A6NDB9 673 aaPredicted RBP21.82■■□□□ 1.08
HSPG2-210ENST00000481644 QRICH1Q2TAL8 776 aa21.82■■□□□ 1.08
HSPG2-210ENST00000481644 RNF207Q6ZRF8 634 aa21.82■■□□□ 1.08
HSPG2-210ENST00000481644 CATIPQ7Z7H3 387 aa21.82■■□□□ 1.08
HSPG2-210ENST00000481644 MTA3Q9BTC8 594 aa21.82■■□□□ 1.08
HSPG2-210ENST00000481644 SENP6Q9GZR1 1112 aaPredicted RBP21.82■■□□□ 1.08
HSPG2-210ENST00000481644 LY9Q9HBG7 655 aa21.82■■□□□ 1.08
HSPG2-210ENST00000481644 LRRC37A2A6NM11 1700 aa21.82■■□□□ 1.08
HSPG2-210ENST00000481644 ASTN1O14525 1302 aa21.81■■□□□ 1.08
HSPG2-210ENST00000481644 ABCB11O95342 1321 aa21.81■■□□□ 1.08
HSPG2-210ENST00000481644 TROAPQ12815 778 aa21.81■■□□□ 1.08
HSPG2-210ENST00000481644 LRRC41Q15345 812 aa21.81■■□□□ 1.08
HSPG2-210ENST00000481644 SLC30A10Q6XR72 485 aa21.81■■□□□ 1.08
HSPG2-210ENST00000481644 LENG1Q96BZ8 264 aaPredicted RBP21.81■■□□□ 1.08
HSPG2-210ENST00000481644 TMEM87BQ96K49 555 aa21.81■■□□□ 1.08
HSPG2-210ENST00000481644 PURBQ96QR8 312 aaKnown RBP21.81■■□□□ 1.08
HSPG2-210ENST00000481644 PGK1P00558 417 aa21.8■■□□□ 1.08
HSPG2-210ENST00000481644 CALML3P27482 149 aa21.8■■□□□ 1.08
HSPG2-210ENST00000481644 CCDC144BQ3MJ40 725 aa21.8■■□□□ 1.08
HSPG2-210ENST00000481644 FBXO11Q86XK2 927 aa21.8■■□□□ 1.08
HSPG2-210ENST00000481644 C7orf61Q8IZ16 206 aa21.8■■□□□ 1.08
HSPG2-210ENST00000481644 GPHNQ9NQX3 736 aaPredicted RBP21.8■■□□□ 1.08
HSPG2-210ENST00000481644 ADD3Q9UEY8 706 aaKnown RBP21.8■■□□□ 1.08
HSPG2-210ENST00000481644 SH2B2O14492 632 aaPredicted RBP21.79■■□□□ 1.08
HSPG2-210ENST00000481644 ALDH5A1P51649 535 aaPredicted RBP21.79■■□□□ 1.08
HSPG2-210ENST00000481644 RPS6P62753 249 aaKnown RBP21.79■■□□□ 1.08
HSPG2-210ENST00000481644 COL9A3Q14050 684 aaPredicted RBP21.79■■□□□ 1.08
HSPG2-210ENST00000481644 NFXL1Q6ZNB6 911 aa21.79■■□□□ 1.08
HSPG2-210ENST00000481644 RNF180Q86T96 592 aa21.79■■□□□ 1.08
HSPG2-210ENST00000481644 ZNF654Q8IZM8 581 aa21.79■■□□□ 1.08
HSPG2-210ENST00000481644 NUP133Q8WUM0 1156 aa21.79■■□□□ 1.08
HSPG2-210ENST00000481644 KATNBL1Q9H079 304 aa21.79■■□□□ 1.08
HSPG2-210ENST00000481644 DDAH1O94760 285 aa21.78■■□□□ 1.08
HSPG2-210ENST00000481644 LRRC26Q2I0M4 334 aa21.78■■□□□ 1.08
HSPG2-210ENST00000481644 TMTC2Q8N394 836 aa21.78■■□□□ 1.08
HSPG2-210ENST00000481644 MTMR8Q96EF0 704 aa21.78■■□□□ 1.08
HSPG2-210ENST00000481644 AMNQ9BXJ7 453 aa21.78■■□□□ 1.08
HSPG2-210ENST00000481644 DDX49Q9Y6V7 483 aaKnown RBP21.78■■□□□ 1.08
HSPG2-210ENST00000481644 SYNRGQ9UMZ2 1314 aa21.78■■□□□ 1.08
HSPG2-210ENST00000481644 CCDC69A6NI79 296 aa21.77■■□□□ 1.08
HSPG2-210ENST00000481644 ZBTB5O15062 677 aa21.77■■□□□ 1.08
HSPG2-210ENST00000481644 DUSP11O75319 330 aaKnown RBP21.77■■□□□ 1.08
HSPG2-210ENST00000481644 HOMER1Q86YM7 354 aa21.77■■□□□ 1.08
HSPG2-210ENST00000481644 RGS22Q8NE09 1264 aa21.77■■□□□ 1.08
HSPG2-210ENST00000481644 CTCFLQ8NI51 663 aaPredicted RBP21.77■■□□□ 1.08
HSPG2-210ENST00000481644 NEK1Q96PY6 1258 aa21.77■■□□□ 1.08
HSPG2-210ENST00000481644 MYL10Q9BUA6 226 aa21.77■■□□□ 1.08
HSPG2-210ENST00000481644 MRPL11Q9Y3B7 192 aaKnown RBP21.77■■□□□ 1.08
HSPG2-210ENST00000481644 LOC102724159A0A0B4J2E5 919 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 ADCY6O43306 1168 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 ADAMTS4O75173 837 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 ADCYAP1R1P41586 468 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 LIFRP42702 1097 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 ATN1P54259 1190 aaPredicted RBP21.76■■□□□ 1.07
HSPG2-210ENST00000481644 KRT32Q14532 448 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 PWP2Q15269 919 aaKnown RBP21.76■■□□□ 1.07
HSPG2-210ENST00000481644 TSGA10IPQ3SY00 556 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 EEPD1Q7L9B9 569 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 MCF2L2Q86YR7 1114 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 FBXO16Q8IX29 292 aaPredicted RBP21.76■■□□□ 1.07
HSPG2-210ENST00000481644 RASEFQ8IZ41 740 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 MORC4Q8TE76 937 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 MAP3K14Q99558 947 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 LRRC2Q9BYS8 371 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 MAF1Q9H063 256 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 RIOX1Q9H6W3 641 aa21.76■■□□□ 1.07
HSPG2-210ENST00000481644 BAZ2BQ9UIF8 2168 aaKnown RBP21.76■■□□□ 1.07
HSPG2-210ENST00000481644 REC8O95072 547 aa21.75■■□□□ 1.07
HSPG2-210ENST00000481644 KIF5BP33176 963 aa21.75■■□□□ 1.07
HSPG2-210ENST00000481644 SLC35G1Q2M3R5 365 aa21.75■■□□□ 1.07
HSPG2-210ENST00000481644 DNERQ8NFT8 737 aa21.75■■□□□ 1.07
HSPG2-210ENST00000481644 FERMT2Q96AC1 680 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms