RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 EHHADHQ08426 723 aa12.71□□□□□ -0.37
DDX39B-219ENST00000481456 PPP2R5EQ16537 467 aa12.71□□□□□ -0.37
DDX39B-219ENST00000481456 HS2ST1Q7LGA3 356 aa12.71□□□□□ -0.37
DDX39B-219ENST00000481456 BANK1Q8NDB2 785 aa12.71□□□□□ -0.37
DDX39B-219ENST00000481456 RGS16O15492 202 aaPredicted RBP12.71□□□□□ -0.38
DDX39B-219ENST00000481456 NEBLO76041 1014 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 ARL6IP4Q66PJ3 421 aaKnown RBP12.71□□□□□ -0.38
DDX39B-219ENST00000481456 GSPT2Q8IYD1 628 aaKnown RBP12.71□□□□□ -0.38
DDX39B-219ENST00000481456 ITSN1Q15811 1721 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 USP17L12C9JPN9 530 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 USP17L21D6R901 530 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 MCAMP43121 646 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 KIF11P52732 1056 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 RCAN1P53805 252 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 CUL4BQ13620 913 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 RAD9BQ6WBX8 426 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 LMNTD2Q8IXW0 634 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 RUBCNQ92622 972 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 AK8Q96MA6 479 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 STRBPQ96SI9 672 aaKnown RBP12.71□□□□□ -0.38
DDX39B-219ENST00000481456 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 PARP2Q9UGN5 583 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 AMFRQ9UKV5 643 aa12.71□□□□□ -0.38
DDX39B-219ENST00000481456 CASP1P29466 404 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 EIF4A3P38919 411 aaKnown RBP12.7□□□□□ -0.38
DDX39B-219ENST00000481456 TECP42680 631 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 POLR2FP61218 127 aaKnown RBP12.7□□□□□ -0.38
DDX39B-219ENST00000481456 PDCLQ13371 301 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 MAN2A1Q16706 1144 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 HERC4Q5GLZ8 1057 aaPredicted RBP12.7□□□□□ -0.38
DDX39B-219ENST00000481456 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 GPKOWQ92917 476 aaPredicted RBP eCLIP12.7□□□□□ -0.38
DDX39B-219ENST00000481456 EEF2KMTQ96G04 330 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 PCDHA4Q9UN74 947 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 CHGBP05060 677 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 TFAP4Q01664 338 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 HLA-DOAP06340 250 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 PLCG2P16885 1265 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 ALDH3A1P30838 453 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 ADCY7P51828 1080 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 NELFCDQ8IXH7 590 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 LRRN4CLQ8ND94 238 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 NLRP3Q96P20 1036 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 ZNF446Q9NWS9 450 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 CLGNO14967 610 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 ATP1A1P05023 1023 aaKnown RBP12.7□□□□□ -0.38
DDX39B-219ENST00000481456 HAUS3Q68CZ6 603 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 REXO1Q8N1G1 1221 aaKnown RBP12.7□□□□□ -0.38
DDX39B-219ENST00000481456 STAG1Q8WVM7 1258 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 TMEM51Q9NW97 253 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 LIMA1Q9UHB6 759 aaKnown RBP12.7□□□□□ -0.38
DDX39B-219ENST00000481456 ODF2LQ9ULJ1 636 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 GDAQ9Y2T3 454 aa12.7□□□□□ -0.38
DDX39B-219ENST00000481456 BCAMP50895 628 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 MRPL12P52815 198 aaKnown RBP12.69□□□□□ -0.38
DDX39B-219ENST00000481456 BEND6Q5SZJ8 279 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-219ENST00000481456 RSRC2Q7L4I2 434 aaKnown RBP12.69□□□□□ -0.38
DDX39B-219ENST00000481456 ADD3Q9UEY8 706 aaKnown RBP12.69□□□□□ -0.38
DDX39B-219ENST00000481456 SMCO2A6NFE2 343 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 PRKAB2O43741 272 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 LCORLQ8N3X6 602 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 HPCAL4Q9UM19 191 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 DIP2CQ9Y2E4 1556 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 HEG1Q9ULI3 1381 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 ERBB3P21860 1342 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 MAP3K15Q6ZN16 1313 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 CTNNA2P26232 953 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
DDX39B-219ENST00000481456 ZNF804AQ7Z570 1209 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 NEK8Q86SG6 692 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
DDX39B-219ENST00000481456 CCDC197Q8NCU1 140 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 DISC1Q9NRI5 854 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 CORO7P57737 925 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 NCAPHQ15003 741 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 ATG9AQ7Z3C6 839 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 RPAINQ86UA6 219 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 MSANTD4Q8NCY6 345 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 ANKRD26Q9UPS8 1709 aa12.69□□□□□ -0.38
DDX39B-219ENST00000481456 A0A1W2PQC6 194 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 TTC26A0AVF1 554 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 HIBADHP31937 336 aaKnown RBP12.68□□□□□ -0.38
DDX39B-219ENST00000481456 MTA3Q9BTC8 594 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 NT5C3AQ9H0P0 336 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 NFU1Q9UMS0 254 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 FRMD4BQ9Y2L6 1034 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 ATP6V0A2Q9Y487 856 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 SOS2Q07890 1332 aaPredicted RBP12.68□□□□□ -0.38
DDX39B-219ENST00000481456 ATP2A1O14983 1001 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 PCK1P35558 622 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 FOXO4P98177 505 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 TRIM65Q6PJ69 517 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 RPGRQ92834 1020 aaKnown RBP12.68□□□□□ -0.38
DDX39B-219ENST00000481456 FAM114A2Q9NRY5 505 aa12.68□□□□□ -0.38
DDX39B-219ENST00000481456 CPSF2Q9P2I0 782 aaKnown RBP12.68□□□□□ -0.38
DDX39B-219ENST00000481456 CHUKO15111 745 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms