RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
PCIF1-202ENST00000479348 PFASO15067 1338 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 ADD1P35611 737 aaKnown RBP16.19■□□□□ 0.18
PCIF1-202ENST00000479348 FUT2Q10981 343 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 CPLX2Q6PUV4 134 aaKnown RBP16.19■□□□□ 0.18
PCIF1-202ENST00000479348 DPP9Q86TI2 863 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 HOMER1Q86YM7 354 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 TNS4Q8IZW8 715 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 ANKRD35Q8N283 1001 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 SAMD3Q8N6K7 520 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 RGS22Q8NE09 1264 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 DDX11Q96FC9 970 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 APBA2Q99767 749 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 MCOLN1Q9GZU1 580 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 SLKQ9H2G2 1235 aaPredicted RBP16.19■□□□□ 0.18
PCIF1-202ENST00000479348 HOMER2Q9NSB8 354 aa16.19■□□□□ 0.18
PCIF1-202ENST00000479348 RBM27Q9P2N5 1060 aaKnown RBP16.19■□□□□ 0.18
PCIF1-202ENST00000479348 DIS3Q9Y2L1 958 aaKnown RBP16.19■□□□□ 0.18
PCIF1-202ENST00000479348 ZSWIM8A7E2V4 1837 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 ZNF236Q9UL36 1845 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 ST18O60284 1047 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 CAPN15O75808 1086 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 IFNAR1P17181 557 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 USH1GQ495M9 461 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 MUM1L1Q5H9M0 696 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 MCF2L2Q86YR7 1114 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 CMTR1Q8N1G2 835 aaKnown RBP16.18■□□□□ 0.18
PCIF1-202ENST00000479348 SLAIN1Q8ND83 568 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 TPCN1Q9ULQ1 816 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 PCDHA1Q9Y5I3 950 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 PTCH2Q9Y6C5 1203 aa16.18■□□□□ 0.18
PCIF1-202ENST00000479348 DOCK3Q8IZD9 2030 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 CNTNAP5Q8WYK1 1306 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 DNAJC25-GNG10A0A024R161 153 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 CPLX1O14810 134 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 ADCY3O60266 1144 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 PFKFB2O60825 505 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 PPP1R11O60927 126 aaPredicted RBP16.17■□□□□ 0.18
PCIF1-202ENST00000479348 CCT2P78371 535 aaKnown RBP16.17■□□□□ 0.18
PCIF1-202ENST00000479348 NTRK3Q16288 839 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 CCDC82Q8N4S0 544 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 CLEC4DQ8WXI8 215 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
PCIF1-202ENST00000479348 A1CFQ9NQ94 594 aaKnown RBP16.17■□□□□ 0.18
PCIF1-202ENST00000479348 MAP3K20Q9NYL2 800 aaKnown RBP16.17■□□□□ 0.18
PCIF1-202ENST00000479348 LIMCH1Q9UPQ0 1083 aa16.17■□□□□ 0.18
PCIF1-202ENST00000479348 hCG_1984214I3L0E3 225 aa16.16■□□□□ 0.18
PCIF1-202ENST00000479348 PRPF3O43395 683 aaKnown RBP16.16■□□□□ 0.18
PCIF1-202ENST00000479348 COBLO75128 1261 aa16.16■□□□□ 0.18
PCIF1-202ENST00000479348 CDKL5O76039 1030 aa16.16■□□□□ 0.18
PCIF1-202ENST00000479348 CYP2B6P20813 491 aa16.16■□□□□ 0.18
PCIF1-202ENST00000479348 GRK4P32298 578 aa16.16■□□□□ 0.18
PCIF1-202ENST00000479348 ZNF713Q8N859 430 aaPredicted RBP16.16■□□□□ 0.18
PCIF1-202ENST00000479348 ZSCAN31Q96LW9 406 aaPredicted RBP16.16■□□□□ 0.18
PCIF1-202ENST00000479348 RNF26Q9BY78 433 aaPredicted RBP16.16■□□□□ 0.18
PCIF1-202ENST00000479348 NCOA5Q9HCD5 579 aaKnown RBP16.16■□□□□ 0.18
PCIF1-202ENST00000479348 CYP39A1Q9NYL5 469 aa16.16■□□□□ 0.18
PCIF1-202ENST00000479348 V9GY48 417 aaPredicted RBP16.16■□□□□ 0.18
PCIF1-202ENST00000479348 PLXNB2O15031 1838 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 BAZ2BQ9UIF8 2168 aaKnown RBP16.15■□□□□ 0.18
PCIF1-202ENST00000479348 NFIBO00712 420 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 MCM2P49736 904 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 AKAP17AQ02040 695 aaKnown RBP16.15■□□□□ 0.18
PCIF1-202ENST00000479348 STK3Q13188 491 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 ZNF792Q3KQV3 632 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 SLC9C1Q4G0N8 1177 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 OLFML2BQ68BL8 750 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 NSMFQ6X4W1 530 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 ZNF467Q7Z7K2 595 aaPredicted RBP16.15■□□□□ 0.18
PCIF1-202ENST00000479348 TEX2Q8IWB9 1127 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 MSL3Q8N5Y2 521 aaKnown RBP16.15■□□□□ 0.18
PCIF1-202ENST00000479348 PIBF1Q8WXW3 757 aa16.15■□□□□ 0.18
PCIF1-202ENST00000479348 MYH6P13533 1939 aa16.14■□□□□ 0.17
PCIF1-202ENST00000479348 POTEB2H3BUK9 544 aa16.14■□□□□ 0.17
PCIF1-202ENST00000479348 GHRHRQ02643 423 aa16.14■□□□□ 0.17
PCIF1-202ENST00000479348 SCRN1Q12765 414 aa16.14■□□□□ 0.17
PCIF1-202ENST00000479348 ME3Q16798 604 aa16.14■□□□□ 0.17
PCIF1-202ENST00000479348 RNF207Q6ZRF8 634 aa16.14■□□□□ 0.17
PCIF1-202ENST00000479348 TRIM22Q8IYM9 498 aa16.14■□□□□ 0.17
PCIF1-202ENST00000479348 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
PCIF1-202ENST00000479348 NPLOC4Q8TAT6 608 aa16.14■□□□□ 0.17
PCIF1-202ENST00000479348 SH2B1Q9NRF2 756 aaPredicted RBP16.14■□□□□ 0.17
PCIF1-202ENST00000479348 LOC102724159A0A0B4J2E5 919 aa16.13■□□□□ 0.17
PCIF1-202ENST00000479348 PTPDC1A2A3K4 754 aa16.13■□□□□ 0.17
PCIF1-202ENST00000479348 HMGCRP04035 888 aa16.13■□□□□ 0.17
PCIF1-202ENST00000479348 PGK2P07205 417 aa16.13■□□□□ 0.17
PCIF1-202ENST00000479348 SSRP1Q08945 709 aaKnown RBP16.13■□□□□ 0.17
PCIF1-202ENST00000479348 BAATQ14032 418 aaPredicted RBP16.13■□□□□ 0.17
PCIF1-202ENST00000479348 PWP2Q15269 919 aaKnown RBP16.13■□□□□ 0.17
PCIF1-202ENST00000479348 PFKFB3Q16875 520 aaPredicted RBP16.13■□□□□ 0.17
PCIF1-202ENST00000479348 MFSD14CQ5VZR4 134 aa16.13■□□□□ 0.17
PCIF1-202ENST00000479348 GTF3C6Q969F1 213 aa16.13■□□□□ 0.17
PCIF1-202ENST00000479348 ARMC5Q96C12 935 aa16.13■□□□□ 0.17
PCIF1-202ENST00000479348 MAML3Q96JK9 1138 aa16.13■□□□□ 0.17
PCIF1-202ENST00000479348 ADD3Q9UEY8 706 aaKnown RBP16.13■□□□□ 0.17
PCIF1-202ENST00000479348 ZNFX1Q9P2E3 1918 aaKnown RBP16.12■□□□□ 0.17
PCIF1-202ENST00000479348 SMCHD1A6NHR9 2005 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 hCG_1642624A0A1W2PR95 340 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 IGHA2P01877 340 aa16.12■□□□□ 0.17
PCIF1-202ENST00000479348 SCG2P13521 617 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms