RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 GRIN2DO15399 1336 aa13.12□□□□□ -0.31
HDLBP-237ENST00000479169 IGFBP4P22692 258 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 STAT2P52630 851 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 CCL23P55773 120 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 IKQ13123 557 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-237ENST00000479169 FSCN1Q16658 493 aaKnown RBP13.11□□□□□ -0.31
HDLBP-237ENST00000479169 TMEM63BQ5T3F8 832 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 C20orf194Q5TEA3 1177 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 OTOP2Q7RTS6 562 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 SLC43A3Q8NBI5 491 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 SEC62Q99442 399 aaKnown RBP13.11□□□□□ -0.31
HDLBP-237ENST00000479169 TRPV6Q9H1D0 765 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 PDGFCQ9NRA1 345 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 MSRAQ9UJ68 235 aa13.11□□□□□ -0.31
HDLBP-237ENST00000479169 GNEQ9Y223 722 aaKnown RBP13.11□□□□□ -0.31
HDLBP-237ENST00000479169 DYNC1LI2O43237 492 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-237ENST00000479169 B4GALT4O60513 344 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 FGBP02675 491 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 TSPY3P0CV98 308 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 TSPY8P0CW00 308 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 ALAS1P13196 640 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 SMPD1P17405 629 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 COL9A1P20849 921 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 RABGGTBP53611 331 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 PSMC6P62333 389 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 ITGA7Q13683 1181 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 RAB30Q15771 203 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 MUM1L1Q5H9M0 696 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 EEPD1Q7L9B9 569 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 FBXO16Q8IX29 292 aaPredicted RBP13.1□□□□□ -0.31
HDLBP-237ENST00000479169 IFNL3Q8IZI9 196 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 ATXN2LQ8WWM7 1075 aaKnown RBP13.1□□□□□ -0.31
HDLBP-237ENST00000479169 ASB2Q96Q27 587 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 PURBQ96QR8 312 aaKnown RBP13.1□□□□□ -0.31
HDLBP-237ENST00000479169 NOC4LQ9BVI4 516 aaKnown RBP13.1□□□□□ -0.31
HDLBP-237ENST00000479169 WNT8AQ9H1J5 351 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 ZNF287Q9HBT7 754 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 TET1Q8NFU7 2136 aa13.1□□□□□ -0.31
HDLBP-237ENST00000479169 ASB14A6NK59 587 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 PATL2C9JE40 543 aaKnown RBP13.09□□□□□ -0.31
HDLBP-237ENST00000479169 ZFYP08048 801 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-237ENST00000479169 MYOGP15173 224 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 GNAT2P19087 354 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 MCCP23508 829 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 TFAP4Q01664 338 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 KCTD1Q719H9 257 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 FAM160B2Q86V87 743 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 ADAMTS19Q8TE59 1207 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 CHURC1Q8WUH1 139 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 STAG1Q8WVM7 1258 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 VWCEQ96DN2 955 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 GPATCH3Q96I76 525 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 TRERF1Q96PN7 1200 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 AP5M1Q9H0R1 490 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 CHMP4BQ9H444 224 aaKnown RBP13.09□□□□□ -0.31
HDLBP-237ENST00000479169 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
HDLBP-237ENST00000479169 TRIP12Q14669 1992 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-237ENST00000479169 CABYRO75952 493 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 FDX1P10109 184 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 SLC1A4P43007 532 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 PDE4BQ07343 736 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 TAPT1Q6NXT6 567 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 MICALL1Q8N3F8 863 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 SCLYQ96I15 445 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 GMCL1Q96IK5 515 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 MTIF3Q9H2K0 278 aaKnown RBP13.08□□□□□ -0.32
HDLBP-237ENST00000479169 SLC28A3Q9HAS3 691 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 INCENPQ9NQS7 918 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 SCN10AQ9Y5Y9 1956 aa13.08□□□□□ -0.32
HDLBP-237ENST00000479169 NMT2O60551 498 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 MRPS5P82675 430 aaKnown RBP13.07□□□□□ -0.32
HDLBP-237ENST00000479169 PPARAQ07869 468 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 TKFCQ3LXA3 575 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 NSMFQ6X4W1 530 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 NECAB3Q96P71 396 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-237ENST00000479169 UHRF1Q96T88 793 aaPredicted RBP13.07□□□□□ -0.32
HDLBP-237ENST00000479169 NACAP1Q9BZK3 213 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 NAPBQ9H115 298 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 CYP39A1Q9NYL5 469 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 RCAN3Q9UKA8 241 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 PRR12Q9ULL5 1215 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 BRWD1Q9NSI6 2320 aa13.07□□□□□ -0.32
HDLBP-237ENST00000479169 TANC1Q9C0D5 1861 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 PTPRSQ13332 1948 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 ZEB2O60315 1214 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 CTDSPL2Q05D32 466 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 PPP2R2DQ66LE6 453 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 IQSEC1Q6DN90 963 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 KIAA1211Q6ZU35 1233 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 PPP1R13LQ8WUF5 828 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 ALDH8A1Q9H2A2 487 aaPredicted RBP13.06□□□□□ -0.32
HDLBP-237ENST00000479169 IL17RBQ9NRM6 502 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 TRMT13Q9NUP7 481 aaKnown RBP13.06□□□□□ -0.32
HDLBP-237ENST00000479169 CCPG1Q9ULG6 757 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 STX8Q9UNK0 236 aa13.06□□□□□ -0.32
HDLBP-237ENST00000479169 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDLBP-237ENST00000479169 SLC4A7Q9Y6M7 1214 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms