RNA–Protein interactions for RNA: ENST00000478230.5

SNX21-210, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 907 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-210ENST00000478230 FBXO11Q86XK2 927 aa17.57■□□□□ 0.4
SNX21-210ENST00000478230 MB21D2Q8IYB1 491 aaPredicted RBP17.57■□□□□ 0.4
SNX21-210ENST00000478230 DIS3LQ8TF46 1054 aaKnown RBP17.57■□□□□ 0.4
SNX21-210ENST00000478230 XPNPEP3Q9NQH7 507 aa17.57■□□□□ 0.4
SNX21-210ENST00000478230 ZHX1Q9UKY1 873 aaPredicted RBP17.57■□□□□ 0.4
SNX21-210ENST00000478230 MRPL11Q9Y3B7 192 aaKnown RBP17.57■□□□□ 0.4
SNX21-210ENST00000478230 PTPDC1A2A3K4 754 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 REC8O95072 547 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 SNAI1O95863 264 aaPredicted RBP17.56■□□□□ 0.4
SNX21-210ENST00000478230 ZNF865P0CJ78 1059 aaPredicted RBP17.56■□□□□ 0.4
SNX21-210ENST00000478230 CALM1P0DP23 149 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 CALM2P0DP24 149 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 CALM3P0DP25 149 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 COL6A1P12109 1028 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 KIF5BP33176 963 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 GNAQP50148 359 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 CNTN2Q02246 1040 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 BAATQ14032 418 aaPredicted RBP17.56■□□□□ 0.4
SNX21-210ENST00000478230 CDC37Q16543 378 aaPredicted RBP17.56■□□□□ 0.4
SNX21-210ENST00000478230 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 SAMD3Q8N6K7 520 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 DNERQ8NFT8 737 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 VAT1LQ9HCJ6 419 aa17.56■□□□□ 0.4
SNX21-210ENST00000478230 PALM3A6NDB9 673 aaPredicted RBP17.55■□□□□ 0.4
SNX21-210ENST00000478230 CCDC69A6NI79 296 aa17.55■□□□□ 0.4
SNX21-210ENST00000478230 PRC1O43663 620 aa17.55■□□□□ 0.4
SNX21-210ENST00000478230 DUSP11O75319 330 aaKnown RBP17.55■□□□□ 0.4
SNX21-210ENST00000478230 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
SNX21-210ENST00000478230 HMGB1P09429 215 aaKnown RBP17.55■□□□□ 0.4
SNX21-210ENST00000478230 MNX1P50219 401 aaPredicted RBP17.55■□□□□ 0.4
SNX21-210ENST00000478230 GRM4Q14833 912 aa17.55■□□□□ 0.4
SNX21-210ENST00000478230 SYNE3Q6ZMZ3 975 aa17.55■□□□□ 0.4
SNX21-210ENST00000478230 STOX1Q6ZVD7 989 aa17.55■□□□□ 0.4
SNX21-210ENST00000478230 CCDC144CPQ8IYA2 1237 aa17.55■□□□□ 0.4
SNX21-210ENST00000478230 CTCFLQ8NI51 663 aaPredicted RBP17.55■□□□□ 0.4
SNX21-210ENST00000478230 IGDCC4Q8TDY8 1250 aa17.55■□□□□ 0.4
SNX21-210ENST00000478230 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
SNX21-210ENST00000478230 TSEN34Q9BSV6 310 aaKnown RBP17.55■□□□□ 0.4
SNX21-210ENST00000478230 AMNQ9BXJ7 453 aa17.55■□□□□ 0.4
SNX21-210ENST00000478230 SENP6Q9GZR1 1112 aaPredicted RBP17.55■□□□□ 0.4
SNX21-210ENST00000478230 PLXNA1Q9UIW2 1896 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 H0YGN5 161 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 DDAH1O94760 285 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 LIFRP42702 1097 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 LRRC41Q15345 812 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 TSGA10IPQ3SY00 556 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 USH1GQ495M9 461 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 GJC2Q5T442 439 aaPredicted RBP17.54■□□□□ 0.4
SNX21-210ENST00000478230 IQSEC1Q6DN90 963 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 CLEC4DQ8WXI8 215 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 JMJD4Q9H9V9 463 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 MAP3K20Q9NYL2 800 aaKnown RBP17.54■□□□□ 0.4
SNX21-210ENST00000478230 MAD2L2Q9UI95 211 aa17.54■□□□□ 0.4
SNX21-210ENST00000478230 SOWAHBA6NEL2 793 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 NFIBO00712 420 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 ZBTB5O15062 677 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 EPB41L2O43491 1005 aaKnown RBP17.53■□□□□ 0.4
SNX21-210ENST00000478230 TAL1P17542 331 aaPredicted RBP17.53■□□□□ 0.4
SNX21-210ENST00000478230 CALML3P27482 149 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 SMARCA1P28370 1054 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 QRICH1Q2TAL8 776 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 CCDC144BQ3MJ40 725 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 ANO1Q5XXA6 986 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 SKAP1Q86WV1 359 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 PCSK9Q8NBP7 692 aaKnown RBP17.53■□□□□ 0.4
SNX21-210ENST00000478230 NEK1Q96PY6 1258 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 VTA1Q9NP79 307 aa17.53■□□□□ 0.4
SNX21-210ENST00000478230 MOXD2PA6NHM9 499 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 EIF5BO60841 1220 aaKnown RBP17.52■□□□□ 0.4
SNX21-210ENST00000478230 ALDH5A1P51649 535 aaPredicted RBP17.52■□□□□ 0.4
SNX21-210ENST00000478230 ANTXR2P58335 489 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 RPS6P62753 249 aaKnown RBP17.52■□□□□ 0.4
SNX21-210ENST00000478230 TNFAIP2Q03169 654 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 TROAPQ12815 778 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 NOL8Q76FK4 1167 aaKnown RBP17.52■□□□□ 0.4
SNX21-210ENST00000478230 ZNF654Q8IZM8 581 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 STAG2Q8N3U4 1231 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 MORC4Q8TE76 937 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 NUP133Q8WUM0 1156 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 FGD4Q96M96 766 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 RIOX1Q9H6W3 641 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 Q9Y3F1 56 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 TAF6LQ9Y6J9 622 aa17.52■□□□□ 0.4
SNX21-210ENST00000478230 ZEB2O60315 1214 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 PGK1P00558 417 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 PDE4DQ08499 809 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 C7orf61Q8IZ16 206 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 MTMR8Q96EF0 704 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 AP5M1Q9H0R1 490 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 CPVLQ9H3G5 476 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 LY9Q9HBG7 655 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 PRKAG2Q9UGJ0 569 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 PHF24Q9UPV7 400 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 SLC12A7Q9Y666 1083 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 CENPFP49454 3210 aa17.51■□□□□ 0.39
SNX21-210ENST00000478230 PNMA6FA0A0J9YX94 578 aa17.5■□□□□ 0.39
SNX21-210ENST00000478230 SH2B2O14492 632 aaPredicted RBP17.5■□□□□ 0.39
SNX21-210ENST00000478230 ADCYAP1R1P41586 468 aa17.5■□□□□ 0.39
SNX21-210ENST00000478230 DHX32Q7L7V1 743 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms